Score E
Sequences producing significant alignments: (bits) Value
emb|AL138690.19| Human DNA sequence from clone RP11-307O13 ... 1273 0.0
dbj|BS000216.1| Pan troglodytes chromosome 22 clone:RP43-05... 98 1e-16
gb|AC133329.4| Homo sapiens chromosome 8 clone RP11-89P9 ma... 84 2e-12
gb|AC104318.2| Homo sapiens chromosome 8 clone RP11-291K24,... 84 2e-12
gb|AC100858.3| Homo sapiens chromosome 8, clone RP11-1082L8... 84 2e-12
dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, s... 84 2e-12
dbj|AP001605.1| Homo sapiens genomic DNA, chromosome 21, cl... 84 2e-12
dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, cl... 84 2e-12
gb|AC146216.3| Pan troglodytes BAC clone RP43-26N18 from ch... 74 2e-09
gb|AC146280.3| Pan troglodytes BAC clone RP43-29P21 from ch... 74 2e-09
gb|AC108114.3| Homo sapiens chromosome 5 clone RP11-289K10,... 74 2e-09
gb|AC147298.4| Pan troglodytes BAC clone RP43-58G7 from chr... 74 2e-09
gb|AC004063.1| Homo sapiens chromosome 4 clone B32I8, compl... 74 2e-09
gb|AC025575.21| Homo sapiens 12 BAC RP11-934P3 (Roswell Par... 72 6e-09
gb|AC242844.2| Homo sapiens FOSMID clone ABC10-44660000A8 f... 70 2e-08
gb|AC234439.3| Homo sapiens FOSMID clone ABC12-7921349P3 fr... 70 2e-08
gb|AC215524.3| Homo sapiens FOSMID clone ABC7-42391500H16 f... 70 2e-08
gb|AC215220.2| Homo sapiens FOSMID clone ABC7-43041300I9 fr... 70 2e-08
gb|AC213861.3| Homo sapiens FOSMID clone WI2-1161P17 from c... 70 2e-08
gb|AC016588.9| Homo sapiens chromosome 19 clone CTD-3113P16... 70 2e-08
gb|AC016629.7| Homo sapiens chromosome 19 clone LLNLR-271E8... 70 2e-08
emb|AL353667.10| Human DNA sequence from clone RP11-125B21 ... 70 2e-08
gb|AC138031.2| Homo sapiens chromosome 5 clone XXcos-B22C29... 70 2e-08
gb|AC137817.1| Homo sapiens chromosome 16 clone XXcos-y2118... 70 2e-08
gb|AC002055.2| Homo sapiens Chromosome 22q13 Cosmid Clone n... 70 2e-08
gb|AC139099.2| Homo sapiens chromosome 17, clone G549, comp... 70 2e-08
dbj|AP006330.2| Homo sapiens genomic DNA, chromosome Un clo... 70 2e-08
dbj|AP006324.2| Homo sapiens genomic DNA, chromosome Un clo... 70 2e-08
dbj|AP006311.2| Homo sapiens genomic DNA, chromosome Un clo... 70 2e-08
dbj|AP006331.2| Homo sapiens genomic DNA, chromosome Un clo... 70 2e-08
dbj|AP006329.2| Homo sapiens genomic DNA, chromosome Un clo... 70 2e-08
dbj|AP006328.2| Homo sapiens genomic DNA, chromosome Un clo... 70 2e-08
dbj|AP006325.2| Homo sapiens genomic DNA, chromosome Un clo... 70 2e-08
dbj|AP001761.1| Homo sapiens genomic DNA, chromosome 21q, s... 70 2e-08
dbj|AP001478.1| Homo sapiens genomic DNA, chromosome 21q22.... 70 2e-08
emb|AL078621.19| Human DNA sequence from clone RP11-395L14 ... 70 2e-08
emb|FN413232.1| Equus caballus microsatellite DNA, locus AB... 68 1e-07
gb|AC193929.3| Pan troglodytes BAC clone CH251-359F23 from ... 68 1e-07
gb|AC074043.12| Homo sapiens 3 BAC RP11-561O4 (Roswell Park... 68 1e-07
emb|AL590378.5| Human DNA sequence from clone RP11-49L2 on ... 68 1e-07
gb|AC147384.3| Pan troglodytes BAC clone RP43-158M15 from c... 66 4e-07
gb|AC147386.3| Pan troglodytes BAC clone RP43-156E24 from c... 66 4e-07
gb|AC092595.2| Homo sapiens BAC clone RP11-94N7 from 7, com... 66 4e-07
gb|AC003044.1| Homo sapiens PAC clone RP5-1055C4 from 7, co... 66 4e-07
gb|AC142339.1| Pan troglodytes BAC clone RP43-42C16 from ch... 66 4e-07
gb|AC113356.2| Homo sapiens chromosome 5 clone CTD-3035P15,... 66 4e-07
emb|AL359979.10| Human DNA sequence from clone RP11-239E10 ... 66 4e-07
gb|AC104425.5| Homo sapiens chromosome 8, clone CTD-2609O6,... 66 4e-07
emb|AL355615.12| Human DNA sequence from clone RP11-33E24 o... 66 4e-07
gb|AC137549.1| Homo sapiens chromosome 5 clone RP11-159K7, ... 66 4e-07
gb|AC017013.8| Homo sapiens BAC clone RP11-141P6 from 4, co... 66 4e-07
gb|AC136500.1| Homo sapiens chromosome 5 clone RP11-56P2, c... 66 4e-07
emb|FN408985.1| Equus caballus microsatellite DNA, locus AB... 64 2e-06
gb|AC202675.5| Rhesus Macaque BAC CH250-420P6 () complete s... 64 2e-06
gb|AC095021.2| Sus scrofa clone RP44-290D23, complete sequence 64 2e-06
emb|AL117337.26| Human DNA sequence from clone RP11-393J16 ... 64 2e-06
gb|AC112127.5| Homo sapiens 3 BAC RP11-20N7 (Roswell Park C... 64 2e-06
gb|AC105216.3| Homo sapiens chromosome 18, clone RP11-382C1... 64 2e-06
gb|AC106811.2| Homo sapiens chromosome 5 clone RP11-551B15,... 64 2e-06
gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D2... 64 2e-06
emb|AL163538.9| Human DNA sequence from clone RP11-323P14 o... 64 2e-06
emb|AL353730.13| Human DNA sequence from clone RP11-55P9 on... 64 2e-06
gb|AC104395.4| Homo sapiens BAC clone RP11-488M9 from 2, co... 64 2e-06
gb|AF205588.1|AF205588 Homo sapiens ZNF01 and HUMORFKG1B ge... 64 2e-06
ref|XR_020738.2| PREDICTED: Pan troglodytes 60S ribosomal p... 62 6e-06
gb|AC231555.3| Lama pacos clone CH246-461M14, complete sequ... 62 6e-06
emb|CR394530.16| Human DNA sequence from clone WI2-2208P10 ... 62 6e-06
gb|AC213859.2| Homo sapiens FOSMID clone WI2-1528O10 from c... 62 6e-06
ref|NR_003572.2| Homo sapiens ribosomal protein L23a pseudo... 62 6e-06
gb|AC204739.3| Pan troglodytes BAC clone CH251-288P6 from c... 62 6e-06
gb|AC200072.3| Pan troglodytes BAC clone CH251-657J2 from c... 62 6e-06
gb|AC195644.2| Pan troglodytes BAC clone CH251-267D20 from ... 62 6e-06
gb|AC188602.3| Pan troglodytes BAC clone CH251-680O13 from ... 62 6e-06
gb|BC064938.1| Homo sapiens hypothetical protein LOC644128,... 62 6e-06
gb|AC091770.5| Homo sapiens BAC clone RP11-655M5 from 7, co... 62 6e-06
gb|BC052779.1| Homo sapiens cDNA clone IMAGE:5266068 62 6e-06
dbj|AK127000.1| Homo sapiens cDNA FLJ45055 fis, clone BRAWH... 62 6e-06
emb|BX322534.3| Human DNA sequence from clone XXyac-2136_A ... 62 6e-06
emb|AL512343.21| Human DNA sequence from clone RP11-396C23 ... 62 6e-06
gb|AC099052.2| Homo sapiens chromosome 3 clone RP11-437M11,... 62 6e-06
gb|AC092041.2| Homo sapiens chromosome 3 clone RP11-132K4, ... 62 6e-06
gb|AC093913.2| Homo sapiens BAC clone RP11-768G3 from 4, co... 62 6e-06
gb|AC092795.2| Homo sapiens chromosome 3 clone RP11-9J18, c... 62 6e-06
emb|AL136966.27| Human DNA sequence from clone RP11-96M12 o... 62 6e-06
gb|AC074191.3| Homo sapiens chromosome 11 clone RP11-502G22... 62 6e-06
gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1,... 62 6e-06
gb|AC110274.5| Homo sapiens chromosome 8, clone RP11-161B15... 62 6e-06
gb|AC092047.3| Homo sapiens chromosome 3 clone RP11-219I21,... 62 6e-06
gb|AC079402.5| Homo sapiens BAC clone RP11-597E15 from 2, c... 62 6e-06
gb|AC012500.7| Homo sapiens BAC clone RP11-434M17 from 2, c... 62 6e-06
gb|AF270529.2|AF270529 Homo sapiens clone ctg0029c26t3_26dR... 62 6e-06
gb|AF229525.1|AF229525 Homo sapiens clone 1qtel590 sequence 62 6e-06
gb|AC006059.3| Homo sapiens PAC RPCI4-613B23 (Roswell Park ... 62 6e-06
gb|AC004908.1|AC004908 Homo sapiens PAC clone RP5-855D21, c... 62 6e-06
>emb|AL138690.19| Human DNA sequence from clone RP11-307O13 on chromosome 13q12.3-14.2
Contains the 5' end of the NBEA gene for neurobeachin
(BCL8B FLJ10197 KIAA1544) and a CpG island, complete
sequence
Length = 186593
Score = 1273 bits (642), Expect = 0.0
Identities = 743/763 (97%), Gaps = 12/763 (1%)
Strand = Plus / Minus
Query: 17 tcttctcctgctctaggagactggagcttccggttctgtggcctt-ggactcaaactggg 75
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 22212 tcttctcctgctctaggagactggagcttccggttctgtggcctttggactcaaactggg 22153
Query: 76 actgggacttacaccattggcttccctggttctcaagtcttgg-gctaaggctggaactg 134
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 22152 actgggacttacaccattggcttccctggttctcaagtcttggagctaaggctggaactg 22093
Query: 135 ttaagtggtaattgggctttcctgggcctccagtgtgcagaca-catattgtggaacttc 193
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 22092 ttaagtggtaattgggctttcctgggcctccagtgtgcagacagcatattgtggaacttc 22033
Query: 194 tcagcctccataattatgtgagtcagtccctataataaatctctt-ctatatatctctat 252
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 22032 tcagcctccataattatgtgagtcagtccctataataaatctctttctatatatctctat 21973
Query: 253 atattctattgattctgtttatctgaagatccgtcgctaatac-ggaggtaacattattg 311
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 21972 atattctattgattctgtttatctgaagatccgtcgctaatacaggaggtaacattattg 21913
Query: 312 gaaagaatctgagattttgtctatgtgagaagtctttgttttc-taaatagtcaatgaaa 370
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 21912 gaaagaatctgagattttgtctatgtgagaagtctttgttttcataaatagtcaatgaaa 21853
Query: 371 taaagtaaacataaaccatggaagttattctgtaggacataaa-tccttgtcatctaggc 429
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 21852 taaagtaaacataaaccatggaagttattctgtaggacataaaatccttgtcatctaggc 21793
Query: 430 agattgcacagaaggtaaaaaataaacttttataattgagac-tgaccaataatccgaga 488
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 21792 agattgcacagaaggtaaaaaataaacttttataattgagacttgaccaataatccgaga 21733
Query: 489 taatctcattcttttaaaagagagaaactgaattccagttttg-atcagtataatatttg 547
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 21732 taatctcattcttttaaaagagagaaactgaattccagttttgcatcagtataatatttg 21673
Query: 548 atactaaaccnnnnnnngaaaatcttagaaataactcaccaaa-cataggtagcactgat 606
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 21672 atactaaacctttttttgaaaatcttagaaataactcaccaaaccataggtagcactgat 21613
Query: 607 caggacaaataaaattcccttttcttgagctctctgtatcat-ctatatctatacacgtc 665
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 21612 caggacaaataaaattcccttttcttgagctctctgtatcatcctatatctatacacgtc 21553
Query: 666 ttttataatacaggttttcaaagtggcaaaaatgaacatattc-ttaacaaactccaaat 724
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 21552 ttttataatacaggttttcaaagtggcaaaaatgaacatattcattaacaaactccaaat 21493
Query: 725 atagagaatctctatactctataaacataaataacaaaaagtg 767
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 21492 atagagattctctatactctataaacataaataacaaaaagtg 21450
>dbj|BS000216.1| Pan troglodytes chromosome 22 clone:RP43-057N15, map 22, complete
sequences
Length = 164711
Score = 97.6 bits (49), Expect = 1e-16
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 181 attgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttct 240
|||||||||||||| |||||||||| ||||||| || | || ||||||||||||||||
Sbjct: 141927 attgtggaacttcttgacctccataatcatgtgagccaattcccataataaatctcttct 141986
Query: 241 atatatctctatatattctattgattctgtttatctg 277
|||||||| ||||||| |||||| |||||||| ||||
Sbjct: 141987 atatatctatatatatcctattggttctgtttctctg 142023
>gb|AC133329.4| Homo sapiens chromosome 8 clone RP11-89P9 map q24.13, complete sequence
Length = 157249
Score = 83.8 bits (42), Expect = 2e-12
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 189 acttctcagcctccataattatgtgagtcagtccct-ataataaatctctt-ctatatat 246
||||||||| ||||||||| |||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 146753 acttctcagactccataatcatgtgagtcaatccctcataataaatctctttctatatat 146694
Query: 247 ctctatatattctattgattctgttt 272
||||| | |||||||| ||||||||
Sbjct: 146693 ctctacttcttctattggttctgttt 146668
>gb|AC104318.2| Homo sapiens chromosome 8 clone RP11-291K24, complete sequence
Length = 183038
Score = 83.8 bits (42), Expect = 2e-12
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 189 acttctcagcctccataattatgtgagtcagtccct-ataataaatctctt-ctatatat 246
||||||||| ||||||||| |||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 50222 acttctcagactccataatcatgtgagtcaatccctcataataaatctctttctatatat 50163
Query: 247 ctctatatattctattgattctgttt 272
||||| | |||||||| ||||||||
Sbjct: 50162 ctctacttcttctattggttctgttt 50137
>gb|AC100858.3| Homo sapiens chromosome 8, clone RP11-1082L8, complete sequence
Length = 188064
Score = 83.8 bits (42), Expect = 2e-12
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 189 acttctcagcctccataattatgtgagtcagtccct-ataataaatctctt-ctatatat 246
||||||||| ||||||||| |||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 19574 acttctcagactccataatcatgtgagtcaatccctcataataaatctctttctatatat 19515
Query: 247 ctctatatattctattgattctgttt 272
||||| | |||||||| ||||||||
Sbjct: 19514 ctctacttcttctattggttctgttt 19489
>dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, section 43/105
Length = 340000
Score = 83.8 bits (42), Expect = 2e-12
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 184 gtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttctata 243
||||||||||| |||||||||| ||||||| || | || |||||||||||| ||||||
Sbjct: 142083 gtggaacttcttgacctccataatcatgtgagccaattcccataataaatctcctctata 142142
Query: 244 tatctctatatattctattgattctgtttatctg 277
||||| ||||||| |||||| |||||||| ||||
Sbjct: 142143 tatctatatatatcctattggttctgtttctctg 142176
>dbj|AP001605.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1987H1, APP-D21S292
region, complete sequence
Length = 165942
Score = 83.8 bits (42), Expect = 2e-12
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 184 gtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttctata 243
||||||||||| |||||||||| ||||||| || | || |||||||||||| ||||||
Sbjct: 44105 gtggaacttcttgacctccataatcatgtgagccaattcccataataaatctcctctata 44164
Query: 244 tatctctatatattctattgattctgtttatctg 277
||||| ||||||| |||||| |||||||| ||||
Sbjct: 44165 tatctatatatatcctattggttctgtttctctg 44198
>dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1648B8, APP-D21S292
region, complete sequence
Length = 186930
Score = 83.8 bits (42), Expect = 2e-12
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 184 gtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttctata 243
||||||||||| |||||||||| ||||||| || | || |||||||||||| ||||||
Sbjct: 169870 gtggaacttcttgacctccataatcatgtgagccaattcccataataaatctcctctata 169929
Query: 244 tatctctatatattctattgattctgtttatctg 277
||||| ||||||| |||||| |||||||| ||||
Sbjct: 169930 tatctatatatatcctattggttctgtttctctg 169963
>gb|AC146216.3| Pan troglodytes BAC clone RP43-26N18 from chromosome 7, complete
sequence
Length = 159257
Score = 73.8 bits (37), Expect = 2e-09
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 185 tggaacttctcagcctccataattatgtgagtcagtccctataataaatctct 237
|||||||||||||| ||||||||| |||||| |||||| ||||||||||||||
Sbjct: 21310 tggaacttctcagcttccataattgtgtgagccagtccttataataaatctct 21362
>gb|AC146280.3| Pan troglodytes BAC clone RP43-29P21 from chromosome 7, complete
sequence
Length = 173940
Score = 73.8 bits (37), Expect = 2e-09
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 185 tggaacttctcagcctccataattatgtgagtcagtccctataataaatctct 237
|||||||||||||| ||||||||| |||||| |||||| ||||||||||||||
Sbjct: 23948 tggaacttctcagcttccataattgtgtgagccagtccttataataaatctct 24000
>gb|AC108114.3| Homo sapiens chromosome 5 clone RP11-289K10, complete sequence
Length = 161812
Score = 73.8 bits (37), Expect = 2e-09
Identities = 80/93 (86%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 178 catattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctct 237
|||| ||||||||||| ||||||||||||| | ||||| || | ||||||||||||||
Sbjct: 100870 catactgtggaacttcacagcctccataatcaagtgagccaattattataataaatctct 100929
Query: 238 tct-atatatctctatatattctattgattctg 269
||| |||||||||||||||| ||||| |||||
Sbjct: 100930 tctcatatatctctatatatcttattggttctg 100962
>gb|AC147298.4| Pan troglodytes BAC clone RP43-58G7 from chromosome 7, complete sequence
Length = 228916
Score = 73.8 bits (37), Expect = 2e-09
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 185 tggaacttctcagcctccataattatgtgagtcagtccctataataaatctct 237
|||||||||||||| ||||||||| |||||| |||||| ||||||||||||||
Sbjct: 133051 tggaacttctcagcttccataattgtgtgagccagtccttataataaatctct 133103
>gb|AC004063.1| Homo sapiens chromosome 4 clone B32I8, complete sequence
Length = 177014
Score = 73.8 bits (37), Expect = 2e-09
Identities = 78/89 (87%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 191 ttctcagcctccataattatgtgagtcagtccct-ataataaatctctt-ctatatatct 248
|||||||||||||||||| ||| || || ||||| ||||||||| |||| | ||||||||
Sbjct: 115079 ttctcagcctccataattgtgtaagccaatccctcataataaatgtctttccatatatct 115020
Query: 249 ctatatattctattgattctgtttatctg 277
||||||| ||||||||||||||| ||||
Sbjct: 115019 gtatatatcctattgattctgtttctctg 114991
>gb|AC025575.21| Homo sapiens 12 BAC RP11-934P3 (Roswell Park Cancer Institute Human BAC
Library) complete sequence
Length = 158531
Score = 71.9 bits (36), Expect = 6e-09
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 177 acatattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatct- 235
||||||||||| |||||||||||| |||||||| | || || | ||||||||||||||
Sbjct: 123237 acatattgtgggacttctcagccttcataattacataagccaattcctataataaatctc 123178
Query: 236 cttctatatatctctatata 255
|| |||||||||||||||||
Sbjct: 123177 ctcctatatatctctatata 123158
>gb|AC242844.2| Homo sapiens FOSMID clone ABC10-44660000A8 from chromosome 1, complete
sequence
Length = 34381
Score = 69.9 bits (35), Expect = 2e-08
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtga 214
|||||||||||||||||||||||||||||||||||
Sbjct: 27855 tattgtggaacttctcagcctccataattatgtga 27889
>gb|AC234439.3| Homo sapiens FOSMID clone ABC12-7921349P3 from chromosome 4, complete
sequence
Length = 39857
Score = 69.9 bits (35), Expect = 2e-08
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 74 ggactgggacttacaccattggcttccctggttctcaagtctt 116
|||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 4017 ggactggggcttacaccattggcttccctggttctcaggtctt 3975
>gb|AC215524.3| Homo sapiens FOSMID clone ABC7-42391500H16 from chromosome 4,
complete sequence
Length = 31434
Score = 69.9 bits (35), Expect = 2e-08
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttc 239
||||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||
Sbjct: 6078 tattgtggaacttctcagcctccataattatgtgaaccagttcccctaatgaatcttctc 6019
Query: 240 t-atatatctctatatattctattgattctg 269
| || ||||| |||||| ||||||||||||
Sbjct: 6018 tcatctatctacatatatcctattgattctg 5988
>gb|AC215220.2| Homo sapiens FOSMID clone ABC7-43041300I9 from chromosome 2, complete
sequence
Length = 36897
Score = 69.9 bits (35), Expect = 2e-08
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttc 239
||||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||
Sbjct: 6255 tattgtggaacttctcagcctccataattatgtgaaccagttcccctaatgaatcttctc 6196
Query: 240 t-atatatctctatatattctattgattctg 269
| || ||||| |||||| ||||||||||||
Sbjct: 6195 tcatctatctacatatatcctattgattctg 6165
>gb|AC213861.3| Homo sapiens FOSMID clone WI2-1161P17 from chromosome 22, complete
sequence
Length = 33328
Score = 69.9 bits (35), Expect = 2e-08
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 180 tattgtggaacttctcagcctccataattatgtga 214
|||||||||||||||||||||||||||||||||||
Sbjct: 6871 tattgtggaacttctcagcctccataattatgtga 6837
>gb|AC016588.9| Homo sapiens chromosome 19 clone CTD-3113P16, complete sequence
Length = 144578
Score = 69.9 bits (35), Expect = 2e-08
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 180 tattgtggaacttctcagcctccataattatgtga 214
|||||||||||||||||||||||||||||||||||
Sbjct: 20023 tattgtggaacttctcagcctccataattatgtga 19989
>gb|AC016629.7| Homo sapiens chromosome 19 clone LLNLR-271E8, complete sequence
Length = 44092
Score = 69.9 bits (35), Expect = 2e-08
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttc 239
||||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||
Sbjct: 42250 tattgtggaacttctcagcctccataattatgtgaaccagttcccctaatgaatcttctc 42309
Query: 240 t-atatatctctatatattctattgattctg 269
| || ||||| |||||| ||||||||||||
Sbjct: 42310 tcatctatctacatatatcctattgattctg 42340
>emb|AL353667.10| Human DNA sequence from clone RP11-125B21 on chromosome 9p24.1-24.3
Contains the 3' end of a novel gene (FLJ35024), complete
sequence
Length = 168366
Score = 69.9 bits (35), Expect = 2e-08
Identities = 79/91 (86%), Gaps = 2/91 (2%)
Strand = Plus / Minus
Query: 149 ggctttcctgggcctccagtgtgcagaca-catattgtggaacttctcagcctccataat 207
||||||||| || ||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 70685 ggctttcctaggtttccagcttgcagacagcatattgtggaacttctcaggctccataaa 70626
Query: 208 tatgtgagtcagtccct-ataataaatctct 237
| |||||| || ||||| |||||||||||||
Sbjct: 70625 tgtgtgagccattccctcataataaatctct 70595
>gb|AC138031.2| Homo sapiens chromosome 5 clone XXcos-B22C29, complete sequence
Length = 43335
Score = 69.9 bits (35), Expect = 2e-08
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttc 239
||||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||
Sbjct: 3447 tattgtggaacttctcagcctccataattatgtgaaccagttcccctaatgaatcttctc 3388
Query: 240 t-atatatctctatatattctattgattctg 269
| || ||||| |||||| ||||||||||||
Sbjct: 3387 tcatctatctacatatatcctattgattctg 3357
>gb|AC137817.1| Homo sapiens chromosome 16 clone XXcos-y2118c7, complete sequence
Length = 41891
Score = 69.9 bits (35), Expect = 2e-08
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttc 239
||||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||
Sbjct: 40867 tattgtggaacttctcagcctccataattatgtgaaccagttcccctaatgaatcttctc 40926
Query: 240 t-atatatctctatatattctattgattctg 269
| || ||||| |||||| ||||||||||||
Sbjct: 40927 tcatctatctacatatatcctattgattctg 40957
>gb|AC002055.2| Homo sapiens Chromosome 22q13 Cosmid Clone n1g3, complete sequence
Length = 41213
Score = 69.9 bits (35), Expect = 2e-08
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtga 214
|||||||||||||||||||||||||||||||||||
Sbjct: 36672 tattgtggaacttctcagcctccataattatgtga 36706
>gb|AC139099.2| Homo sapiens chromosome 17, clone G549, complete sequence
Length = 125104
Score = 69.9 bits (35), Expect = 2e-08
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 180 tattgtggaacttctcagcctccataattatgtga 214
|||||||||||||||||||||||||||||||||||
Sbjct: 4030 tattgtggaacttctcagcctccataattatgtga 3996
>dbj|AP006330.2| Homo sapiens genomic DNA, chromosome Un clone:CMF9-172I10, complete
sequence
Length = 29891
Score = 69.9 bits (35), Expect = 2e-08
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttc 239
||||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||
Sbjct: 6245 tattgtggaacttctcagcctccataattatgtgaaccagttcccctaatgaatcttctc 6186
Query: 240 t-atatatctctatatattctattgattctg 269
| || ||||| |||||| ||||||||||||
Sbjct: 6185 tcatctatctacatatatcctattgattctg 6155
>dbj|AP006324.2| Homo sapiens genomic DNA, chromosome Un clone:CMC5-186E9, telomere
region, complete sequence
Length = 37519
Score = 69.9 bits (35), Expect = 2e-08
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttc 239
||||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||
Sbjct: 30744 tattgtggaacttctcagcctccataattatgtgaaccagttcccctaatgaatcttctc 30803
Query: 240 t-atatatctctatatattctattgattctg 269
| || ||||| |||||| ||||||||||||
Sbjct: 30804 tcatctatctacatatatcctattgattctg 30834
>dbj|AP006311.2| Homo sapiens genomic DNA, chromosome Un clone:CMC7-109D11, telomere
region, complete sequence
Length = 39442
Score = 69.9 bits (35), Expect = 2e-08
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtga 214
|||||||||||||||||||||||||||||||||||
Sbjct: 31462 tattgtggaacttctcagcctccataattatgtga 31496
>dbj|AP006331.2| Homo sapiens genomic DNA, chromosome Un clone:CMF9-451E21, telomere
region, complete sequence
Length = 29271
Score = 69.9 bits (35), Expect = 2e-08
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttc 239
||||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||
Sbjct: 23103 tattgtggaacttctcagcctccataattatgtgaaccagttcccctaatgaatcttctc 23162
Query: 240 t-atatatctctatatattctattgattctg 269
| || ||||| |||||| ||||||||||||
Sbjct: 23163 tcatctatctacatatatcctattgattctg 23193
>dbj|AP006329.2| Homo sapiens genomic DNA, chromosome Un clone:CMF9-145A8, telomere
region, complete sequence
Length = 35356
Score = 69.9 bits (35), Expect = 2e-08
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttc 239
||||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||
Sbjct: 28743 tattgtggaacttctcagcctccataattatgtgaaccagttcccctaatgaatcttctc 28802
Query: 240 t-atatatctctatatattctattgattctg 269
| || ||||| |||||| ||||||||||||
Sbjct: 28803 tcatctatctacatatatcctattgattctg 28833
>dbj|AP006328.2| Homo sapiens genomic DNA, chromosome Un clone:CMF9-135D12, telomere
region, complete sequence
Length = 31503
Score = 69.9 bits (35), Expect = 2e-08
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttc 239
||||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||
Sbjct: 25248 tattgtggaacttctcagcctccataattatgtgaaccagttcccctaatgaatcttctc 25307
Query: 240 t-atatatctctatatattctattgattctg 269
| || ||||| |||||| ||||||||||||
Sbjct: 25308 tcatctatctacatatatcctattgattctg 25338
>dbj|AP006325.2| Homo sapiens genomic DNA, chromosome Un clone:CMC19-26G9, telomere
region, complete sequence
Length = 29804
Score = 69.9 bits (35), Expect = 2e-08
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttc 239
||||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||
Sbjct: 23818 tattgtggaacttctcagcctccataattatgtgaaccagttcccctaatgaatcttctc 23877
Query: 240 t-atatatctctatatattctattgattctg 269
| || ||||| |||||| ||||||||||||
Sbjct: 23878 tcatctatctacatatatcctattgattctg 23908
>dbj|AP001761.1| Homo sapiens genomic DNA, chromosome 21q, section 105/105
Length = 39800
Score = 69.9 bits (35), Expect = 2e-08
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtga 214
|||||||||||||||||||||||||||||||||||
Sbjct: 33053 tattgtggaacttctcagcctccataattatgtga 33087
>dbj|AP001478.1| Homo sapiens genomic DNA, chromosome 21q22.3, clone:f50F5, telomere
region, complete sequence
Length = 10338
Score = 69.9 bits (35), Expect = 2e-08
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtga 214
|||||||||||||||||||||||||||||||||||
Sbjct: 3591 tattgtggaacttctcagcctccataattatgtga 3625
>emb|AL078621.19| Human DNA sequence from clone RP11-395L14 on chromosome 2 Contains the 3'
end of the CBWD2 gene for COBW domain containing 2, the
FOXD4L1 gene for forkhead box D4-like 1, a acrosin (ACR)
pseudogene, a novel phosphoglucomutase like protein
pseudogene, the RABL2A gene for RAB, member of RAS oncogene
family-like 2A, a MGC70863 similar to RPL23AP7 protein
pseudogene, a RPL23A (60S ribosomal protein L23A)
pseudogene, a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide
11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11)
pseudogene, a WAS protein family homolog 1 (WASH1)
pseudogene, a small nuclear ribonucleoprotein polypeptide
A' (SNRPA1) pseudogene, four novel genes and eight CpG
islands, complete sequence
Length = 176734
Score = 69.9 bits (35), Expect = 2e-08
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 180 tattgtggaacttctcagcctccataattatgtga 214
|||||||||||||||||||||||||||||||||||
Sbjct: 115030 tattgtggaacttctcagcctccataattatgtga 114996
>emb|FN413232.1| Equus caballus microsatellite DNA, locus ABGe16816
Length = 842
Score = 67.9 bits (34), Expect = 1e-07
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 189 acttctcagcctccataattatgtgagtcag-tccctataataaatctct 237
|||||||||||||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 341 acttctcagcctccataattgtgtgagtcagttccttataataaatctct 390
>gb|AC193929.3| Pan troglodytes BAC clone CH251-359F23 from chromosome 7, complete
sequence
Length = 170296
Score = 67.9 bits (34), Expect = 1e-07
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctcttc 239
|||||||| |||||||||||||||||| ||||||| || | || |||||||||||||||
Sbjct: 99136 tattgtggtgcttctcagcctccataatcatgtgagccaattcccataataaatctcttc 99077
Query: 240 ta 241
||
Sbjct: 99076 ta 99075
>gb|AC074043.12| Homo sapiens 3 BAC RP11-561O4 (Roswell Park Cancer Institute Human BAC
Library) complete sequence
Length = 192322
Score = 67.9 bits (34), Expect = 1e-07
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 189 acttctcagcctccataattatgtgagtcagtccctataataaatctctt 238
||||||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 55631 acttctcagcctccataattatgtgagccaattcctgtaataaatctctt 55582
>emb|AL590378.5| Human DNA sequence from clone RP11-49L2 on chromosome 10 Contains a novel
gene and a novel MAM domain containing protein, complete
sequence
Length = 150889
Score = 67.9 bits (34), Expect = 1e-07
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 178 catattgtggaacttctcagcctccataattatgtgag 215
||||| ||||||||||||||||||||||||||||||||
Sbjct: 144591 catatcgtggaacttctcagcctccataattatgtgag 144628
>gb|AC147384.3| Pan troglodytes BAC clone RP43-158M15 from chromosome 7, complete
sequence
Length = 212874
Score = 65.9 bits (33), Expect = 4e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctc 236
|||||||| ||||||||||||||||||| ||||||| || | || ||||||||||||
Sbjct: 27088 tattgtgggacttctcagcctccataatgatgtgagccaattcccataataaatctc 27144
>gb|AC147386.3| Pan troglodytes BAC clone RP43-156E24 from chromosome 7, complete
sequence
Length = 191925
Score = 65.9 bits (33), Expect = 4e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctc 236
|||||||| ||||||||||||||||||| ||||||| || | || ||||||||||||
Sbjct: 50121 tattgtgggacttctcagcctccataatgatgtgagccaattcccataataaatctc 50177
>gb|AC092595.2| Homo sapiens BAC clone RP11-94N7 from 7, complete sequence
Length = 136960
Score = 65.9 bits (33), Expect = 4e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctc 236
|||||||| ||||||||||||||||||| ||||||| || | || ||||||||||||
Sbjct: 10523 tattgtgggacttctcagcctccataatgatgtgagccaattcccataataaatctc 10579
>gb|AC003044.1| Homo sapiens PAC clone RP5-1055C4 from 7, complete sequence
Length = 81231
Score = 65.9 bits (33), Expect = 4e-07
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 185 tggaacttctcagcctccataattatgtgagtcagtccctataataaatctct 237
|||||||||||||| ||||||||| |||||| |||||| || |||||||||||
Sbjct: 55151 tggaacttctcagcttccataattgtgtgagccagtccttaaaataaatctct 55203
>gb|AC142339.1| Pan troglodytes BAC clone RP43-42C16 from chromosome 7, complete sequence
Length = 181207
Score = 65.9 bits (33), Expect = 4e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 180 tattgtggaacttctcagcctccataattatgtgagtcagtccctataataaatctc 236
|||||||| ||||||||||||||||||| ||||||| || | || ||||||||||||
Sbjct: 143580 tattgtgggacttctcagcctccataatgatgtgagccaattcccataataaatctc 143636
>gb|AC113356.2| Homo sapiens chromosome 5 clone CTD-3035P15, complete sequence
Length = 30365
Score = 65.9 bits (33), Expect = 4e-07
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 222 cctataataaatctcttc-tatatatctctatatattctattgattctgtttatctgaag 280
|||||||||||||||||| ||||| ||||||||||| ||| || |||||||| |||||||
Sbjct: 29467 cctataataaatctcttcatatatctctctatatatcctactggttctgtttttctgaag 29526
Query: 281 a 281
|
Sbjct: 29527 a 29527
>emb|AL359979.10| Human DNA sequence from clone RP11-239E10 on chromosome 1 Contains the
5' end of the TLR5 gene for toll-like receptor 5, two
novel genes, the gene for a novel protein (FLJ10052) and a
CpG island, complete sequence
Length = 181466
Score = 65.9 bits (33), Expect = 4e-07
Identities = 68/77 (88%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 ttgggctttcctgggcctccagtgtgcagaca-catattgtgga-acttctcagcctcca 203
|||||||| ||||| |||||| |||||||| |||||||||| |||||||||||||||
Sbjct: 39972 ttgggcttctctggggctccagcttgcagacagcatattgtggggacttctcagcctcca 39913
Query: 204 taattatgtgagtcagt 220
|||||||||||| ||||
Sbjct: 39912 taattatgtgaggcagt 39896
>gb|AC104425.5| Homo sapiens chromosome 8, clone CTD-2609O6, complete sequence
Length = 140366
Score = 65.9 bits (33), Expect = 4e-07
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 178 catattgtggaacttctcagcctccataattatgtgagtca 218
|||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 33312 catattgtgggacttctcagcctccataatgatgtgagtca 33352
>emb|AL355615.12| Human DNA sequence from clone RP11-33E24 on chromosome 6 Contains a
ras-related C3 botulinum toxin substrate 3 (rho family,
small GTP binding protein Rac3) pseudogene, two novel
genes, a pseudogene similar to part of heat shock 90kD
protein 1, beta (HSPCB) and a CpG island, complete sequence
Length = 178362
Score = 65.9 bits (33), Expect = 4e-07
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 149 ggctttcctgggcctccagtgtgcagaca-catattgtggaacttctcagcctccataat 207
||||||||||||||||||||||| || | || ||||||| |||||||||||||||||||
Sbjct: 134408 ggctttcctgggcctccagtgtgttgatagcagattgtgggacttctcagcctccataat 134467
Query: 208 tatgtgagtcagtccct 224
|| |||| || |||||
Sbjct: 134468 catttgagccaatccct 134484
>gb|AC137549.1| Homo sapiens chromosome 5 clone RP11-159K7, complete sequence
Length = 138494
Score = 65.9 bits (33), Expect = 4e-07
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 222 cctataataaatctcttc-tatatatctctatatattctattgattctgtttatctgaag 280
|||||||||||||||||| ||||| ||||||||||| ||| || |||||||| |||||||
Sbjct: 31175 cctataataaatctcttcatatatctctctatatatcctactggttctgtttttctgaag 31234
Query: 281 a 281
|
Sbjct: 31235 a 31235
