BLAST Search Results

BLASTN 2.2.9 [May-01-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: /local/db/repository/ncbi/blast/20110525_173832/nt/nt

           14,049,258 sequences; 36,075,095,184 total letters



Query= 55207714
         (859 letters)

Distribution of 1 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|AL139328.8|  Human DNA sequence from clone RP11-84N7 on ...  1221   0.0   

>emb|AL139328.8| Human DNA sequence from clone RP11-84N7 on chromosome 13 Contains part
             of the DGKH gene for diacylglycerol kinase eta, complete
             sequence
          Length = 148430

 Score = 1221 bits (616), Expect = 0.0
 Identities = 735/756 (97%), Gaps = 14/756 (1%)
 Strand = Plus / Minus

                                                                         
Query: 11    acagacccatgttttaccccatcctaaagcctatcttcaccacaatatat-caatatatt 69
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 39948 acagacccatgttttaccccatcctaaagcctatcttcaccacaatatattcaatatatt 39889

                                                                         
Query: 70    gtgtctcctatcataacattgctttttccttttatttgcccttctaaat-tttttatgtg 128
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 39888 gtgtctcctatcataacattgctttttccttttatttgcccttctaaatatttttatgtg 39829

                                                                         
Query: 129   attatcatataagaactatttttccccgtagccatgccggaactcatat-tcagcaatga 187
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 39828 attatcatataagaactatttttccccgtagccatgccggaactcatatctcagcaatga 39769

                                                                         
Query: 188   ctgctcctcc-cccgtgggtctggaagggaagtcatttgatcttgctctg-ttccatctg 245
             |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 39768 ctgctcctcctcccgtgggtctggaagggaagtcatttgatcttgctctgattccatctg 39709

                                                                         
Query: 246   tcaacctccttcatcggccacctgtgaaactgcttcaagcctggctttcg-atcagcctc 304
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 39708 tcaacctccttcatcggccacctgtgaaactgcttcaagcctggctttcgtatcagcctc 39649

                                                                         
Query: 305   caaactttcccatcagctccttttgactccagactcttggctttgtgctg-tatcctcct 363
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 39648 caaactttcccatcagctccttttgactccagactcttggctttgtgctggtatcctcct 39589

                                                                         
Query: 364   ttccccttgtgaattttgtcccaccatgaatttcctactttcttaaaagt-aatgtaaga 422
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 39588 ttccccttgtgaattttgtcccaccatgaatttcctactttcttaaaagtaaatgtaaga 39529

                                                                         
Query: 423   ctctgtatttaaataaggatacatacatgacactaagctctattaaataa-ccagttgct 481
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 39528 ctctgtatttaaataaggatacatacatgacactaagctctattaaataagccagttgct 39469

                                                                         
Query: 482   ctaaagtctggctgatcattacttggagacctttataaacattaatgcac-ttgattcaa 540
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 39468 ctaaagtctggctgatcattacttggagacctttataaacattaatgcactttgattcaa 39409

                                                                         
Query: 541   ttggtttagagtagggcataggaacctacacatactaaaatctcttttgg-gattggaat 599
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 39408 ttggtttagagtagggcataggaacctacacatactaaaatctcttttggtgattggaat 39349

                                                                         
Query: 600   tatcaggcttaaaagactattgtacatataataatttgcataaaaccctttaaaaaggga 659
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 39348 tatcaggcttaaaagactattgtacatataataatttgcat-aaaccctttaaaaaggta 39290

                                                                         
Query: 660   taattcagcacttttgttcctttttccatgcaccctttaactaataacattagttgaaac 719
             |||||||||||||||||||||||||||| ||| ||||||||||||| |||||  || |||
Sbjct: 39289 taattcagcacttttgttcctttttccacgca-cctttaactaatatcattaagtgtaac 39231

                                                 
Query: 720   cacttacttttaacctggctctgtgcattataaaaa 755
             ||||||||||| ||||||||||||||||| ||||||
Sbjct: 39230 cacttactttt-acctggctctgtgcattttaaaaa 39196




  Database: /local/db/repository/ncbi/blast/20110525_173832/nt/nt
    Posted date:  May 25, 2011  7:06 PM
  Number of letters in database: 3,999,844,414
  Number of sequences in database:  1,039,336
  
  Database: /local/db/repository/ncbi/blast/20110525_173832/nt/nt.01
    Posted date:  May 25, 2011  7:08 PM
  Number of letters in database: 3,999,991,702
  Number of sequences in database:  665,328
  
  Database: /local/db/repository/ncbi/blast/20110525_173832/nt/nt.02
    Posted date:  May 25, 2011  7:11 PM
  Number of letters in database: 3,999,887,009
  Number of sequences in database:  945,341
  
  Database: /local/db/repository/ncbi/blast/20110525_173832/nt/nt.03
    Posted date:  May 25, 2011  7:14 PM
  Number of letters in database: 3,999,999,199
  Number of sequences in database:  1,198,614
  
  Database: /local/db/repository/ncbi/blast/20110525_173832/nt/nt.04
    Posted date:  May 25, 2011  7:17 PM
  Number of letters in database: 3,999,948,246
  Number of sequences in database:  1,509,219
  
  Database: /local/db/repository/ncbi/blast/20110525_173832/nt/nt.05
    Posted date:  May 25, 2011  7:21 PM
  Number of letters in database: 3,999,959,256
  Number of sequences in database:  2,004,296
  
  Database: /local/db/repository/ncbi/blast/20110525_173832/nt/nt.06
    Posted date:  May 25, 2011  7:25 PM
  Number of letters in database: 3,999,999,873
  Number of sequences in database:  1,904,076
  
  Database: /local/db/repository/ncbi/blast/20110525_173832/nt/nt.07
    Posted date:  May 25, 2011  7:29 PM
  Number of letters in database: 3,999,999,560
  Number of sequences in database:  2,640,268
  
  Database: /local/db/repository/ncbi/blast/20110525_173832/nt/nt.08
    Posted date:  May 25, 2011  7:33 PM
  Number of letters in database: 3,999,999,712
  Number of sequences in database:  2,123,436
  
  Database: /local/db/repository/ncbi/blast/20110525_173832/nt/nt.09
    Posted date:  May 25, 2011  7:34 PM
  Number of letters in database: 75,466,213
  Number of sequences in database:  19,344
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,468,804
Number of Sequences: 14049258
Number of extensions: 20468804
Number of successful extensions: 453592
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 453576
Number of HSP's gapped (non-prelim): 2
length of query: 859
length of database: 36,075,095,184
effective HSP length: 23
effective length of query: 836
effective length of database: 35,751,962,250
effective search space: 29888640441000
effective search space used: 29888640441000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 31 (61.9 bits)