Score E
Sequences producing significant alignments: (bits) Value
ref|NG_017039.1| Homo sapiens LIM homeobox transcription fa... 918 0.0
emb|AL161908.13| Human DNA sequence from clone RP11-123K19 ... 918 0.0
emb|FM209186.1| Pseudomonas aeruginosa LESB58 complete geno... 412 e-111
gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete ... 412 e-111
gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome 404 e-109
gb|AY658723.1| Synthetic construct Peudomonas aeruginosa cl... 404 e-109
gb|CP000744.1| Pseudomonas aeruginosa PA7, complete genome 389 e-104
gb|CP000680.1| Pseudomonas mendocina ymp, complete genome 194 6e-46
gb|CP002290.1| Pseudomonas putida BIRD-1, complete genome 145 5e-31
gb|FJ853990.1| Pseudomonas putida strain DOT-T1E ABC transp... 129 3e-26
gb|CP000926.1| Pseudomonas putida GB-1, complete genome 129 3e-26
gb|AE015451.1| Pseudomonas putida KT2440 complete genome 129 3e-26
emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome... 127 1e-25
gb|CP000712.1| Pseudomonas putida F1, complete genome 121 7e-24
gb|CP000949.1| Pseudomonas putida W619, complete genome 113 2e-21
gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 109 3e-20
gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, com... 101 7e-18
gb|CP000094.2| Pseudomonas fluorescens Pf0-1, complete genome 98 1e-16
gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000,... 88 1e-13
gb|CP002585.1| Pseudomonas brassicacearum subsp. brassicace... 82 6e-12
gb|CP000826.1| Serratia proteamaculans 568, complete genome 76 4e-10
emb|FN869568.1| Halomonas elongata DSM 2581, complete genome 74 2e-09
gb|CP001655.1| Dickeya zeae Ech1591, complete genome 72 6e-09
gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A,... 68 1e-07
gb|CP000644.1| Aeromonas salmonicida subsp. salmonicida A44... 66 4e-07
gb|CP002378.1| Vibrio furnissii NCTC 11218 chromosome 2, co... 62 6e-06
gb|CP001836.1| Dickeya dadantii Ech586, complete genome 62 6e-06
emb|AM181176.4| Pseudomonas fluorescens SBW25 complete genome 62 6e-06
>ref|NG_017039.1| Homo sapiens LIM homeobox transcription factor 1, beta (LMX1B),
RefSeqGene on chromosome 9
Length = 93590
Score = 918 bits (463), Expect = 0.0
Identities = 519/527 (98%), Gaps = 8/527 (1%)
Strand = Plus / Plus
Query: 248 cgggtgcctgcgaaaactttagtgatgccagaaaaccgtcctggatgag-ctgcagagcg 306
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 7111 cgggtgcctgcgaaaactttagtgatgccagaaaaccgtcctggatgaggctgcagagcg 7170
Query: 307 ggtaggctgcttaggtggtttggtgctcagagagggctgtgtatgccca-gcctccaggg 365
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 7171 ggtaggctgcttaggtggtttggtgctcagagagggctgtgtatgcccaagcctccaggg 7230
Query: 366 aaggaaaagctgggctgccggcgcctcgtggtgagtgcaacctacctgt-ctgcccaggg 424
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 7231 aaggaaaagctgggctgccggcgcctcgtggtgagtgcaacctacctgttctgcccaggg 7290
Query: 425 attgtccccagtccagggcctagtggaaagcagcgcagcccaactgtt-aactgaggcct 483
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 7291 attgtccccagtccagggcctagtggaaagcagcgcagcccaactgtttaactgaggcct 7350
Query: 484 ggaaacagtgcaggccagagccctagagagggcatcggattctacccc-aaaggctctgg 542
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 7351 ggaaacagtgcaggccagagccctagagagggcatcggattctaccccaaaaggctctgg 7410
Query: 543 ctgtgcctggtggtctgggggctgagcctgagctgctttttgcaccta-ctctttcttcc 601
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 7411 ctgtgcctggtggtctgggggctgagcctgagctgctttttgcacctagctctttcttcc 7470
Query: 602 ggctgagggatctttgggtagggattggagtccattcagaggttcagc-gttttgctggt 660
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 7471 ggctgagggatctttgggtagggattggagtccattcagaggttcagctgttttgctggt 7530
Query: 661 cccagagtgcagctgaggccttcctctcagtaggaagcaccccaga-ttaggcacactgc 719
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 7531 cccagagtgcagctgaggccttcctctcagtaggaagcaccccagatttaggcacactgc 7590
Query: 720 cgtaggtcggctttgtgctgtgctctgaactaatatgattctagttc 766
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7591 cgtaggtcggctttgtgctgtgctctgaactaatatgattctagttc 7637
>emb|AL161908.13| Human DNA sequence from clone RP11-123K19 on chromosome 9 Contains two
novel genes, the 5' end of the LMX1B gene for LIM homeobox
transcription factor 1 beta and two CpG islands, complete
sequence
Length = 106216
Score = 918 bits (463), Expect = 0.0
Identities = 519/527 (98%), Gaps = 8/527 (1%)
Strand = Plus / Plus
Query: 248 cgggtgcctgcgaaaactttagtgatgccagaaaaccgtcctggatgag-ctgcagagcg 306
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 66562 cgggtgcctgcgaaaactttagtgatgccagaaaaccgtcctggatgaggctgcagagcg 66621
Query: 307 ggtaggctgcttaggtggtttggtgctcagagagggctgtgtatgccca-gcctccaggg 365
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 66622 ggtaggctgcttaggtggtttggtgctcagagagggctgtgtatgcccaagcctccaggg 66681
Query: 366 aaggaaaagctgggctgccggcgcctcgtggtgagtgcaacctacctgt-ctgcccaggg 424
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 66682 aaggaaaagctgggctgccggcgcctcgtggtgagtgcaacctacctgttctgcccaggg 66741
Query: 425 attgtccccagtccagggcctagtggaaagcagcgcagcccaactgtt-aactgaggcct 483
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 66742 attgtccccagtccagggcctagtggaaagcagcgcagcccaactgtttaactgaggcct 66801
Query: 484 ggaaacagtgcaggccagagccctagagagggcatcggattctacccc-aaaggctctgg 542
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 66802 ggaaacagtgcaggccagagccctagagagggcatcggattctaccccaaaaggctctgg 66861
Query: 543 ctgtgcctggtggtctgggggctgagcctgagctgctttttgcaccta-ctctttcttcc 601
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 66862 ctgtgcctggtggtctgggggctgagcctgagctgctttttgcacctagctctttcttcc 66921
Query: 602 ggctgagggatctttgggtagggattggagtccattcagaggttcagc-gttttgctggt 660
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 66922 ggctgagggatctttgggtagggattggagtccattcagaggttcagctgttttgctggt 66981
Query: 661 cccagagtgcagctgaggccttcctctcagtaggaagcaccccaga-ttaggcacactgc 719
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 66982 cccagagtgcagctgaggccttcctctcagtaggaagcaccccagatttaggcacactgc 67041
Query: 720 cgtaggtcggctttgtgctgtgctctgaactaatatgattctagttc 766
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67042 cgtaggtcggctttgtgctgtgctctgaactaatatgattctagttc 67088
>emb|FM209186.1| Pseudomonas aeruginosa LESB58 complete genome sequence
Length = 6601757
Score = 412 bits (208), Expect = e-111
Identities = 243/248 (97%), Gaps = 5/248 (2%)
Strand = Plus / Plus
Query: 5 ggtgtagaggat-atcaggccggtcttcgagtagagattgaagtcgtcgatccagc-ggc 62
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1963828 ggtgtagaggattatcaggccggtcttcgagtagagattgaagtcgtcgatccagccggc 1963887
Query: 63 ctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcga-cgc 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1963888 ctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcgaacgc 1963947
Query: 122 cagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc-cag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1963948 cagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgcgcag 1964007
Query: 181 gcggctgtcgacgtggcgcagcgaatggctgccgagcaccgcgatgagcaggccga-cag 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1964008 gcggctgtcgacgtggcgcagcgaatggctgccgagcaccgcgatgagcaggccgagcag 1964067
Query: 240 gctcgacc 247
||||||||
Sbjct: 1964068 gctcgacc 1964075
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome
Length = 6537648
Score = 412 bits (208), Expect = e-111
Identities = 243/248 (97%), Gaps = 5/248 (2%)
Strand = Plus / Plus
Query: 5 ggtgtagaggat-atcaggccggtcttcgagtagagattgaagtcgtcgatccagc-ggc 62
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1908234 ggtgtagaggattatcaggccggtcttcgagtagagattgaagtcgtcgatccagccggc 1908293
Query: 63 ctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcga-cgc 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1908294 ctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcgaacgc 1908353
Query: 122 cagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc-cag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1908354 cagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgcgcag 1908413
Query: 181 gcggctgtcgacgtggcgcagcgaatggctgccgagcaccgcgatgagcaggccga-cag 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1908414 gcggctgtcgacgtggcgcagcgaatggctgccgagcaccgcgatgagcaggccgagcag 1908473
Query: 240 gctcgacc 247
||||||||
Sbjct: 1908474 gctcgacc 1908481
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome
Length = 6264404
Score = 404 bits (204), Expect = e-109
Identities = 242/248 (97%), Gaps = 5/248 (2%)
Strand = Plus / Minus
Query: 5 ggtgtagaggat-atcaggccggtcttcgagtagagattgaagtcgtcgatccagc-ggc 62
|||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3638995 ggtgtagaggattatcagaccggtcttcgagtagagattgaagtcgtcgatccagccggc 3638936
Query: 63 ctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcg-acgc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3638935 ctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcgaacgc 3638876
Query: 122 cagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc-cag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3638875 cagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgcgcag 3638816
Query: 181 gcggctgtcgacgtggcgcagcgaatggctgccgagcaccgcgatgagcaggccga-cag 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3638815 gcggctgtcgacgtggcgcagcgaatggctgccgagcaccgcgatgagcaggccgagcag 3638756
Query: 240 gctcgacc 247
||||||||
Sbjct: 3638755 gctcgacc 3638748
>gb|AY658723.1| Synthetic construct Peudomonas aeruginosa clone FLH034769.01F
PA3252 gene, partial cds
Length = 840
Score = 404 bits (204), Expect = e-109
Identities = 242/248 (97%), Gaps = 5/248 (2%)
Strand = Plus / Minus
Query: 5 ggtgtagaggat-atcaggccggtcttcgagtagagattgaagtcgtcgatccagc-ggc 62
|||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 456 ggtgtagaggattatcagaccggtcttcgagtagagattgaagtcgtcgatccagccggc 397
Query: 63 ctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcg-acgc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 396 ctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcgaacgc 337
Query: 122 cagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc-cag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 336 cagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgcgcag 277
Query: 181 gcggctgtcgacgtggcgcagcgaatggctgccgagcaccgcgatgagcaggccga-cag 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 276 gcggctgtcgacgtggcgcagcgaatggctgccgagcaccgcgatgagcaggccgagcag 217
Query: 240 gctcgacc 247
||||||||
Sbjct: 216 gctcgacc 209
>gb|CP000744.1| Pseudomonas aeruginosa PA7, complete genome
Length = 6588339
Score = 389 bits (196), Expect = e-104
Identities = 237/244 (97%), Gaps = 5/244 (2%)
Strand = Plus / Plus
Query: 9 tagaggat-atcaggccggtcttcgagtagagattgaagtcgtcgatccagc-ggcctgc 66
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1912127 tagaggatgatcaggccggtcttcgagtagagattgaagtcgtcgatccagccggcctgc 1912186
Query: 67 ttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcg-acgccagc 125
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1912187 ttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcgaacgccagc 1912246
Query: 126 ggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc-caggcgg 184
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1912247 ggcaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgcgcaggcgg 1912306
Query: 185 ctgtcgacgtggcgcagcgaatggctgccgagcaccgcgatgagcaggccga-caggctc 243
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 1912307 ctgtcgacgtggcgcagcgaatggctgccgagcaccgcgacgagcaggccgagcaggctc 1912366
Query: 244 gacc 247
||||
Sbjct: 1912367 gacc 1912370
>gb|CP000680.1| Pseudomonas mendocina ymp, complete genome
Length = 5072807
Score = 194 bits (98), Expect = 6e-46
Identities = 179/202 (88%), Gaps = 3/202 (1%)
Strand = Plus / Plus
Query: 17 atcaggccggtcttcgagtagagattgaagtcgtcgatccagcggc-ctgcttgagcaac 75
|||||||||||||| |||||||| |||||||| |||||| || |||||||||||
Sbjct: 1490511 atcaggccggtcttggagtagaggttgaagtcctcgatcacgcccatctgcttgagcagg 1490570
Query: 76 agggtcagcgcgccgttgaagccgagcaggatgatgaaggcg-acgccagcggtaccccg 134
| |||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||
Sbjct: 1490571 atggtcagcgcgccgttgaagccgagcaggatgatgaaggcgaaggccagcggcaccccg 1490630
Query: 135 gcgaagttgctggtcatgttggagaaggccatgacgaagtcgc-caggcggctgtcgacg 193
| ||||||||||||||||||||| || |||||||||||||||| |||||||||| |||
Sbjct: 1490631 gagaagttgctggtcatgttggaaaacgccatgacgaagtcgcgcaggcggctgctgacc 1490690
Query: 194 tggcgcagcgaatggctgccga 215
||||||||||||| ||||||||
Sbjct: 1490691 tggcgcagcgaatagctgccga 1490712
>gb|CP002290.1| Pseudomonas putida BIRD-1, complete genome
Length = 5731541
Score = 145 bits (73), Expect = 5e-31
Identities = 107/117 (91%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 62 cctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggc-gacg 120
||||||| |||| |||||||||||||||||||||||| ||||||||||||||||| | |
Sbjct: 4366473 cctgcttcagcagcagggtcagcgcgccgttgaagccaagcaggatgatgaaggcaaagg 4366414
Query: 121 ccagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc 177
|||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 4366413 ccagcggtacgccggcgaagttgctggtcatgttggcgaaggcgctgacgaagtcgc 4366357
>gb|FJ853990.1| Pseudomonas putida strain DOT-T1E ABC transporter,
binding-protein-dependent transport systems inner
membrane components, type I phosphodiesterase/nucleotide
pyrophosphatase, ABC-type Fe3+ transport system
periplasmic component-like protein, and GntR family
transcriptional regulator genes, complete cds
Length = 6159
Score = 129 bits (65), Expect = 3e-26
Identities = 105/117 (89%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 62 cctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggc-gacg 120
||||||| |||| ||| |||||||||||||||||||| ||||||||||||||||| | |
Sbjct: 2284 cctgcttcagcagcagcgtcagcgcgccgttgaagccaagcaggatgatgaaggcaaagg 2343
Query: 121 ccagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc 177
|||||||||| ||||| ||||||||||||||||||| |||||| ||||||||||||
Sbjct: 2344 ccagcggtacgccggcaaagttgctggtcatgttggcgaaggcgctgacgaagtcgc 2400
>gb|CP000926.1| Pseudomonas putida GB-1, complete genome
Length = 6078430
Score = 129 bits (65), Expect = 3e-26
Identities = 105/117 (89%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 62 cctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcgacg- 120
||||||| |||| ||||||||| ||||||||||| || ||||||||||||||||||| |
Sbjct: 1471025 cctgcttcagcagcagggtcagtgcgccgttgaaacccagcaggatgatgaaggcgaagg 1471084
Query: 121 ccagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc 177
||||||| |||||||| ||||||||||||||||||| |||||| ||||||||||||
Sbjct: 1471085 ccagcggcaccccggcaaagttgctggtcatgttggcgaaggcactgacgaagtcgc 1471141
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
Length = 6181863
Score = 129 bits (65), Expect = 3e-26
Identities = 105/117 (89%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 62 cctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggc-gacg 120
||||||| |||| ||| |||||||||||||||||||| ||||||||||||||||| | |
Sbjct: 1924466 cctgcttcagcagcagcgtcagcgcgccgttgaagccaagcaggatgatgaaggcaaagg 1924525
Query: 121 ccagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc 177
|||||||||| ||||| ||||||||||||||||||| |||||| ||||||||||||
Sbjct: 1924526 ccagcggtacgccggcaaagttgctggtcatgttggcgaaggcgctgacgaagtcgc 1924582
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
Length = 5888780
Score = 127 bits (64), Expect = 1e-25
Identities = 104/116 (89%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 63 ctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcg-acgc 121
||||||||||||||| ||||| ||||||||||| || |||||||||||||||||| | ||
Sbjct: 1505131 ctgcttgagcaacagcgtcagtgcgccgttgaaacccagcaggatgatgaaggcgaatgc 1505190
Query: 122 cagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc 177
||| || || ||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 1505191 caggggcacgccggcgaagttgctggtcatgttggcgaaggcactgacgaagtcgc 1505246
>gb|CP000712.1| Pseudomonas putida F1, complete genome
Length = 5959964
Score = 121 bits (61), Expect = 7e-24
Identities = 104/117 (88%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 62 cctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggc-gacg 120
||||||| |||| ||| |||||||||||||||||||| ||||||||||||||||| | |
Sbjct: 4504517 cctgcttcagcagcagcgtcagcgcgccgttgaagccaagcaggatgatgaaggcaaagg 4504458
Query: 121 ccagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc 177
|||||||||| ||||| ||||||||||||||||||| |||||| ||||||| ||||
Sbjct: 4504457 ccagcggtacgccggcaaagttgctggtcatgttggcgaaggcgctgacgaaatcgc 4504401
>gb|CP000949.1| Pseudomonas putida W619, complete genome
Length = 5774330
Score = 113 bits (57), Expect = 2e-21
Identities = 103/117 (88%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 62 cctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcg-acg 120
|||||||||||| |||||||||||| |||||||| ||||||||||||||||| ||| | |
Sbjct: 1412499 cctgcttgagcagcagggtcagcgccccgttgaaaccgagcaggatgatgaacgcgaagg 1412558
Query: 121 ccagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc 177
||||||| || |||||||| |||||||||||||||| ||| || ||||||| ||||
Sbjct: 1412559 ccagcggcacgccggcgaaattgctggtcatgttggcgaaagcgctgacgaaatcgc 1412615
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
Length = 7074893
Score = 109 bits (55), Expect = 3e-20
Identities = 123/143 (86%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 87 gccgttgaagccgagcaggatgatgaaggcgac-gccagcggtaccccggcgaagttgct 145
|||||||||||| ||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 5098408 gccgttgaagcccagcaggatgatgaaggcgaaagccaggggcaccccggcgaagttgct 5098349
Query: 146 ggtcatgttggagaaggccatgacgaagtcgc-caggcggctgtcgacgtggcgcagcga 204
||||||||||| |||||| ||||||||| || |||||| || || ||||||||||
Sbjct: 5098348 ggtcatgttggcgaaggcattgacgaagttgcgcaggcgcgaatccacccggcgcagcga 5098289
Query: 205 atggctgccgagcaccgcgatga 227
| |||||| |||||||||||||
Sbjct: 5098288 gtagctgcccagcaccgcgatga 5098266
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
Length = 6093698
Score = 101 bits (51), Expect = 7e-18
Identities = 85/95 (89%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 63 ctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcg-acgc 121
||||||||| | ||||||||||||||||||||| || |||||||||||||| ||| ||||
Sbjct: 1803793 ctgcttgaggatcagggtcagcgcgccgttgaaccccagcaggatgatgaacgcgaacgc 1803852
Query: 122 cagcggtaccccggcgaagttgctggtcatgttgg 156
||| || || |||||||| ||||||||||||||||
Sbjct: 1803853 cagtggaacgccggcgaaattgctggtcatgttgg 1803887
>gb|CP000094.2| Pseudomonas fluorescens Pf0-1, complete genome
Length = 6438405
Score = 97.6 bits (49), Expect = 1e-16
Identities = 80/89 (89%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 87 gccgttgaagccgagcaggatgatgaaggcga-cgccagcggtaccccggcgaagttgct 145
||||||||||||||||||||||||||| || | |||||| || || ||||||||||||||
Sbjct: 1880821 gccgttgaagccgagcaggatgatgaacgcaaacgccaggggcacgccggcgaagttgct 1880880
Query: 146 ggtcatgttggagaaggccatgacgaagt 174
||||||||||| |||||| |||||||||
Sbjct: 1880881 ggtcatgttggcgaaggcgttgacgaagt 1880909
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000, complete genome
Length = 6397126
Score = 87.7 bits (44), Expect = 1e-13
Identities = 99/116 (85%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 63 ctgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggc-gacgc 121
||||||||| | ||||||||| |||||||||||||| |||||||| |||||||| | ||
Sbjct: 4392426 ctgcttgaggatcagggtcagtgcgccgttgaagcccagcaggataatgaaggcaaatgc 4392367
Query: 122 cagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaagtcgc 177
||| || || ||||| ||||||||||||||||||| ||| | ||||||||||||
Sbjct: 4392366 cagtggaacgccggcaaagttgctggtcatgttggcgaacgagttgacgaagtcgc 4392311
>gb|CP002585.1| Pseudomonas brassicacearum subsp. brassicacearum NFM421, complete genome
Length = 6843248
Score = 81.8 bits (41), Expect = 6e-12
Identities = 78/89 (87%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 87 gccgttgaagccgagcaggatgatgaaggcgacg-ccagcggtaccccggcgaagttgct 145
||||||||| ||||||| ||||||||||||| | |||| || || ||||||||||||||
Sbjct: 5119160 gccgttgaacccgagcaaaatgatgaaggcgaaggccaggggcacgccggcgaagttgct 5119101
Query: 146 ggtcatgttggagaaggccatgacgaagt 174
||||||||||| |||||| |||||||||
Sbjct: 5119100 ggtcatgttggcgaaggcgttgacgaagt 5119072
>gb|CP000826.1| Serratia proteamaculans 568, complete genome
Length = 5448853
Score = 75.8 bits (38), Expect = 4e-10
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 100 agcaggatgatgaaggcga-cgccagcggtaccccggcgaagttgctggtcatgttgg 156
|||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||
Sbjct: 4969555 agcaggatgacgaaggcaaacgccagcggcaccccggcgaagttgctggtcatgttgg 4969612
>emb|FN869568.1| Halomonas elongata DSM 2581, complete genome
Length = 4061296
Score = 73.8 bits (37), Expect = 2e-09
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 102 caggatgatgaaggcgacg-ccagcggtaccccggcgaagttgctggtcatgttggagaa 160
||||||||||||||||| | |||| ||||| |||||||| |||||||||||||||| |||
Sbjct: 2216694 caggatgatgaaggcgaaggccagtggtacgccggcgaaattgctggtcatgttggtgaa 2216753
Query: 161 ggcca 165
|||||
Sbjct: 2216754 ggcca 2216758
>gb|CP001655.1| Dickeya zeae Ech1591, complete genome
Length = 4813854
Score = 71.9 bits (36), Expect = 6e-09
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 118 acgccagcggtaccccggcgaagttgctggtcatgttggagaaggccatgacgaag 173
|||||||||| ||||||||||| ||||||||||||||||| || ||||| ||||||
Sbjct: 839425 acgccagcggcaccccggcgaaattgctggtcatgttggaaaacgccatcacgaag 839370
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
Length = 5928787
Score = 67.9 bits (34), Expect = 1e-07
Identities = 80/94 (85%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 64 tgcttgagcaacagggtcagcgcgccgttgaagccgagcaggatgatgaaggcg-acgcc 122
|||||||| | |||||||| ||||||||||| || ||||| |||||||| ||| |||||
Sbjct: 1846822 tgcttgaggatcagggtcaatgcgccgttgaaacccagcagaatgatgaacgcgaacgcc 1846881
Query: 123 agcggtaccccggcgaagttgctggtcatgttgg 156
| || || ||||| |||||||||||||||||||
Sbjct: 1846882 aatggaacgccggcaaagttgctggtcatgttgg 1846915
>gb|CP000644.1| Aeromonas salmonicida subsp. salmonicida A449, complete genome
Length = 4702402
Score = 65.9 bits (33), Expect = 4e-07
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 85 gcgccgttgaagccgagcaggatgatgaaggcg-acgccagcggtaccccggcgaagttg 143
|||||||||| |||||| | ||||||||||||| |||||||||| || ||| |||||||
Sbjct: 4332107 gcgccgttgatgccgagaatgatgatgaaggcgaacgccagcggcacaccgctgaagttg 4332048
Query: 144 ctggtcatg 152
|||||||||
Sbjct: 4332047 ctggtcatg 4332039
>gb|CP002378.1| Vibrio furnissii NCTC 11218 chromosome 2, complete sequence
Length = 1621862
Score = 61.9 bits (31), Expect = 6e-06
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 79 gtcagcgcgccgttgaagccgagcaggatgatgaaggcga-cgccagcggtaccccggcg 137
||||| ||||||||| |||||| | |||||||||||| | ||||||||| || ||||||
Sbjct: 1217052 gtcagtgcgccgttggtgccgagaatgatgatgaaggcaaacgccagcgggacaccggcg 1217111
Query: 138 aagttgctggtcatgttgg 156
||||| ||| |||||||||
Sbjct: 1217112 aagttactgctcatgttgg 1217130
>gb|CP001836.1| Dickeya dadantii Ech586, complete genome
Length = 4818394
Score = 61.9 bits (31), Expect = 6e-06
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 118 acgccagcggtaccccggcgaagttgctggtcatgttgg 156
||||||||||||| |||||||| ||||||||||||||||
Sbjct: 3897831 acgccagcggtacaccggcgaaattgctggtcatgttgg 3897869
>emb|AM181176.4| Pseudomonas fluorescens SBW25 complete genome
Length = 6722539
Score = 61.9 bits (31), Expect = 6e-06
Identities = 74/87 (85%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 87 gccgttgaagccgagcaggatgatgaaggcgacg-ccagcggtaccccggcgaagttgct 145
||||||||| || |||||||||||||| || | | |||| || || ||||| ||||||||
Sbjct: 2209526 gccgttgaaccccagcaggatgatgaacgcaaaggccaggggcacaccggcaaagttgct 2209585
Query: 146 ggtcatgttggagaaggccatgacgaa 172
||||||||||| |||||| |||||||
Sbjct: 2209586 ggtcatgttggcgaaggcggtgacgaa 2209612
