Score E
Sequences producing significant alignments: (bits) Value
emb|AL159985.11| Human DNA sequence from clone RP11-22L21 o... 1005 0.0
emb|FM209186.1| Pseudomonas aeruginosa LESB58 complete geno... 311 4e-81
gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete ... 303 9e-79
gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome 303 9e-79
gb|CP000744.1| Pseudomonas aeruginosa PA7, complete genome 248 5e-62
gb|AC183806.2| Pan troglodytes BAC clone CH251-20A8 from ch... 82 6e-12
gb|AC185967.2| Pan troglodytes BAC clone CH251-708H21 from ... 82 6e-12
emb|AL031657.5| Human DNA sequence from clone RP1-28F12 on ... 78 1e-10
dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clo... 78 1e-10
dbj|AP002496.3| Homo sapiens genomic DNA, chromosome 11q, c... 78 1e-10
gb|AC008664.6| Homo sapiens chromosome 5 clone CTB-34B5, co... 76 4e-10
gb|AC212700.3| Pongo abelii BAC clone CH276-513J22 from chr... 74 2e-09
gb|AC099064.2| Homo sapiens chromosome 1 clone RP4-754K5, c... 74 2e-09
gb|AC103552.1| Homo sapiens chromosome 1 clone RP11-442N6, ... 74 2e-09
gb|AC117465.13| Homo sapiens 3 BAC RP11-706D8 (Roswell Park... 72 6e-09
gb|AC114399.2| Homo sapiens chromosome 3 clone RP11-1019A2,... 72 6e-09
gb|AC099777.2| Homo sapiens chromosome 3 clone RP11-332H21,... 72 6e-09
ref|NG_012883.2| Homo sapiens kinesin-associated protein 3 ... 70 2e-08
gb|AC022832.13| Homo sapiens chromosome 8, clone RP11-145O1... 70 2e-08
emb|AL356475.11| Human DNA sequence from clone RP11-332H17 ... 70 2e-08
emb|AL136122.6| Human DNA sequence from clone RP3-413L20 on... 70 2e-08
gb|AC090945.1| Homo sapiens chromosome 3 clone RP11-255O19 ... 70 2e-08
ref|NG_007089.1| Homo sapiens arylsulfatase B (ARSB), RefSe... 68 9e-08
gb|AC198677.5| Rhesus Macaque BAC CH250-141L22 () complete ... 68 9e-08
gb|AC161020.2| Pan troglodytes BAC clone CH251-19C5 from ch... 68 9e-08
gb|AC157088.2| Pan troglodytes BAC clone CH251-497H13 from ... 68 9e-08
gb|AC149232.2| Pan troglodytes BAC clone CH251-38H5 from 7,... 68 9e-08
gb|AC092447.5| Homo sapiens BAC clone RP11-760D2 from 7, co... 68 9e-08
gb|AC107626.2| Homo sapiens chromosome 3 clone RP11-1008M1,... 68 9e-08
gb|AC114963.2| Homo sapiens chromosome 5 clone RP11-21K15, ... 68 9e-08
gb|AC109462.2| Homo sapiens chromosome 16 clone RP11-26L20,... 68 9e-08
gb|AC104443.2| Homo sapiens chromosome 3 clone RP11-306N11,... 68 9e-08
gb|AC109136.1| Homo sapiens chromosome 16 clone RP11-629D22... 68 9e-08
gb|AC099485.2| Homo sapiens chromosome 5 clone CTD-2008M24,... 68 9e-08
gb|AC026424.5| Homo sapiens chromosome 5 clone CTD-2174D2, ... 68 9e-08
emb|AL138725.19| Human DNA sequence from clone RP11-528A10 ... 68 9e-08
emb|AL078461.38| Human DNA sequence from clone RP5-901O8 on... 68 9e-08
emb|AL109977.7| Human DNA sequence from clone RP4-591F14 on... 68 9e-08
gb|AC010245.4|AC010245 Homo sapiens chromosome 5 clone CTC-... 68 9e-08
gb|AC008488.7|AC008488 Homo sapiens chromosome 5 clone CTC-... 68 9e-08
gb|AC015971.4| Homo sapiens BAC clone RP11-269K22 from 2, c... 68 9e-08
ref|XM_002814885.1| PREDICTED: Pongo abelii hypothetical pr... 66 4e-07
gb|AC187369.3| Pan troglodytes BAC clone CH251-582D12 from ... 66 4e-07
emb|CT867968.2| Human DNA sequence from clone XX-HCC1954_40... 66 4e-07
emb|CT867979.1| Human DNA sequence from clone XX-HCC1954_40... 66 4e-07
gb|AC114483.2| Homo sapiens chromosome 1 clone RP4-600M23, ... 66 4e-07
gb|AC010299.8| Homo sapiens chromosome 5 clone CTB-174J2, c... 66 4e-07
gb|AC091821.3| Homo sapiens chromosome 5 clone CTC-325G23, ... 66 4e-07
emb|AL589745.8| Human DNA sequence from clone RP11-478K15 o... 66 4e-07
gb|AC087312.8| Homo sapiens 12p BAC RP11-615I16 (Roswell Pa... 66 4e-07
emb|AL035089.21| Human DNA sequence from clone RP5-1030M6 o... 66 4e-07
emb|AL023754.1| Human DNA sequence from clone RP1-272L16 on... 66 4e-07
gb|AC136632.3| Homo sapiens chromosome 5 clone RP11-889L3, ... 66 4e-07
gb|AC136601.2| Homo sapiens chromosome 5 clone RP11-1259L22... 66 4e-07
gb|AC093128.3| Papio anubis clone RP41-374D15, complete seq... 66 4e-07
gb|AC093124.3| Papio anubis clone RP41-216E17, complete seq... 66 4e-07
gb|AC125489.4| Homo sapiens BAC clone RP13-490A4 from 4, co... 66 4e-07
gb|AC010226.5|AC010226 Homo sapiens chromosome 5 clone CTC-... 66 4e-07
gb|AC095067.4| Homo sapiens BAC clone RP11-655F21 from 7, c... 64 1e-06
gb|AC025469.6| Homo sapiens chromosome 5 clone CTD-2380K1, ... 64 1e-06
emb|AL354699.11| Human DNA sequence from clone RP11-349E20 ... 64 1e-06
emb|AL391416.9| Human DNA sequence from clone RP11-378G13 o... 64 1e-06
gb|AC104763.12| Homo sapiens chromosome 17, clone RP11-3K24... 64 1e-06
gb|AC133522.3| Homo sapiens BAC clone RP11-1277J4 from 2, c... 64 1e-06
gb|AC009967.8| Homo sapiens BAC clone RP11-401O19 from 2, c... 64 1e-06
gb|AC006368.2| Homo sapiens BAC clone RP11-252C12 from 2, c... 64 1e-06
emb|BX649174.1| Homo sapiens mRNA; cDNA DKFZp686H1994 (from... 64 1e-06
gb|AC239376.3| Chlorocebus aethiops BAC clone CH252-48A12 f... 62 6e-06
ref|NG_013036.1| Homo sapiens neuronal PAS domain protein 3... 62 6e-06
gb|AC215788.3| MACACA MULATTA BAC clone CH250-90O12 from ch... 62 6e-06
gb|AC204237.4| Rhesus Macaque BAC CH250-498I21 () complete ... 62 6e-06
gb|AC200593.4| Rhesus Macaque BAC CH250-313E5 () complete s... 62 6e-06
gb|AC196447.3| MACACA MULATTA BAC clone CH250-435C15 from c... 62 6e-06
gb|AC186767.1| Pongo abelii chromosome UNK clone CH276-48H1... 62 6e-06
gb|AF161801.5| Homo sapiens chromosome 8 clone GS1-2g21 map... 62 6e-06
gb|AC119034.2| Homo sapiens 3 BAC RP11-303O22 (Roswell Park... 62 6e-06
emb|BX248123.5| Human DNA sequence from clone RP11-589B3 on... 62 6e-06
gb|AC090912.6| Homo sapiens chromosome 18, clone RP11-370A5... 62 6e-06
emb|AL772182.3| Human DNA sequence from clone RP11-36K22 on... 62 6e-06
gb|AC112210.2| Homo sapiens chromosome 3 clone RP11-221D23,... 62 6e-06
emb|AL513174.19| Human DNA sequence from clone RP11-40F6 on... 62 6e-06
gb|AC100818.2| Homo sapiens chromosome 8, clone RP11-473J6,... 62 6e-06
gb|AC098656.2| Homo sapiens chromosome 1 clone RP11-297I23,... 62 6e-06
gb|AC068139.6| Homo sapiens chromosome 10 clone RP11-506M13... 62 6e-06
emb|AL353623.16| Human DNA sequence from clone RP11-376H15 ... 62 6e-06
gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J... 62 6e-06
gb|AC093694.4| Homo sapiens BAC clone RP11-769N3 from 4, co... 62 6e-06
gb|AC108174.1| Homo sapiens chromosome 5 clone RP11-78C3, c... 62 6e-06
gb|AC011418.5| Homo sapiens chromosome 5 clone CTB-9P16, co... 62 6e-06
gb|AC012495.9| Homo sapiens BAC clone RP11-327F6 from 2, co... 62 6e-06
gb|AC018922.22| Homo sapiens 12 BAC RP11-485C17 (Roswell Pa... 62 6e-06
emb|AL590725.5| Human DNA sequence from clone RP11-107L15 o... 62 6e-06
emb|AL157836.11| Human DNA sequence from clone RP11-477D14 ... 62 6e-06
emb|AL031735.9| Human DNA sequence from clone RP1-69M21 on ... 62 6e-06
emb|AL022329.9| Human DNA sequence from clone CTA-407F11 on... 62 6e-06
gb|AC006058.1| Homo sapiens 3p22-7 PAC RPCI4-555D20 (Roswel... 62 6e-06
gb|AC024590.8| Homo sapiens chromosome 16 clone RP11-487C14... 62 6e-06
gb|AC138304.1| Homo sapiens chromosome 16 clone CTD-2588J6,... 62 6e-06
gb|AC114778.5| Homo sapiens BAC clone RP11-516O5 from 2, co... 62 6e-06
gb|AC092679.2| Homo sapiens BAC clone RP11-676D22 from 2, c... 62 6e-06
>emb|AL159985.11| Human DNA sequence from clone RP11-22L21 on chromosome 6 Contains a
novel gene (HSPC125, my013, FLJ22592) and two CpG islands,
complete sequence
Length = 114521
Score = 1005 bits (507), Expect = 0.0
Identities = 577/587 (98%), Gaps = 10/587 (1%)
Strand = Plus / Minus
Query: 180 tacaacagaatactgacactaggtagtttgtaaagaaaagaggtttatttagctcac-gt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 52559 tacaacagaatactgacactaggtagtttgtaaagaaaagaggtttatttagctcacagt 52500
Query: 239 tccgcaggctggcaagttcaaggcgcatggtgccagcatctactaagcctctggtgagg- 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52499 tccgcaggctggcaagttcaaggcgcatggtgccagcatctactaagcctctggtgaggg 52440
Query: 298 cttctgtgctgcatcatgacacagcaaaagttaaaaagaaagcagacacatgtgaag-gg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 52439 cttctgtgctgcatcatgacacagcaaaagttaaaaagaaagcagacacatgtgaagagg 52380
Query: 357 caaaacctgaggtgtgccctggctttataacaacctgctttcaacatagtcatttat-gc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 52379 caaaacctgaggtgtgccctggctttataacaacctgctttcaacatagtcatttattgc 52320
Query: 416 tgtgagaactaatccagtattgccagagagagaatggcatcaaaccatttataaaag-tc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 52319 tgtgagaactaatccagtattgccagagagagaatggcatcaaaccatttataaaagatc 52260
Query: 475 tgcccccatgactcaagcacctcccattaggtcccacctccctacactggggggtcaa-c 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 52259 tgcccccatgactcaagcacctcccattaggtcccacctccctacactggggggtcaaac 52200
Query: 534 ctcaacatgagttttggtggggacaaaggatatccaagccacagcactattttaaca-ga 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 52199 ctcaacatgagttttggtggggacaaaggatatccaagccacagcactattttaacaaga 52140
Query: 593 gatcattcttcaggacttattatctgttattttatgaatttcttaaatattcaggaa-aa 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 52139 gatcattcttcaggacttattatctgttattttatgaatttcttaaatattcaggaacaa 52080
Query: 652 atgctatggtagtatctttagaaataaaaacagtatgtatactccataggctatttg-aa 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 52079 atgctatggtagtatctttagaaataaaaacagtatgtatactccataggctatttgaaa 52020
Query: 711 acactgttttgttttattataaattagtaatatttaaaatgtagata 757
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 52019 acactg-tttgttttattataaattagtaatatttaaaatgtagata 51974
>emb|FM209186.1| Pseudomonas aeruginosa LESB58 complete genome sequence
Length = 6601757
Score = 311 bits (157), Expect = 4e-81
Identities = 171/173 (98%), Gaps = 2/173 (1%)
Strand = Plus / Plus
Query: 7 gagcatcgccctggaagacagcgacttccgcctgtcgctgtccggccaggaag-cgacgg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4110147 gagcatcgccctggaagacagcgacttccgcctgtcgctgtccggccaggaagacgacgg 4110206
Query: 66 cttcgaccacgaccacgacggtcacgccctgcgcgacggccgccggctcagcc-cttcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4110207 cttcgaccacgaccacgacggtcacgccctgcgcgacggccgccggctcagccgcttcaa 4110266
Query: 125 cctcaacgccagccacagcctggcgccgaaccagagcctggagtggcaactgg 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4110267 cctcaacgccagccacagcctggcgccgaaccagagcctggagtggcaactgg 4110319
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome
Length = 6537648
Score = 303 bits (153), Expect = 9e-79
Identities = 170/173 (98%), Gaps = 2/173 (1%)
Strand = Plus / Plus
Query: 7 gagcatcgccctggaagacagcgacttccgcctgtcgctgtccggccaggaag-cgacgg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3885474 gagcatcgccctggaagacagcgacttccgcctgtcgctgtccggccaggaagacgacgg 3885533
Query: 66 cttcgaccacgaccacgacggtcacgccctgcgcgacggccgccggctcagcc-cttcaa 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3885534 cttcgaccacgacctcgacggtcacgccctgcgcgacggccgccggctcagccgcttcaa 3885593
Query: 125 cctcaacgccagccacagcctggcgccgaaccagagcctggagtggcaactgg 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3885594 cctcaacgccagccacagcctggcgccgaaccagagcctggagtggcaactgg 3885646
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome
Length = 6264404
Score = 303 bits (153), Expect = 9e-79
Identities = 170/173 (98%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 7 gagcatcgccctggaagacagcgacttccgcctgtcgctgtccggccaggaag-cgacgg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1758034 gagcatcgccctggaagacagcgacttccgcctgtcgctgtccggccaggaagacgacgg 1757975
Query: 66 cttcgaccacgaccacgacggtcacgccctgcgcgacggccgccggctcagcc-cttcaa 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1757974 cttcgaccacgacctcgacggtcacgccctgcgcgacggccgccggctcagccgcttcaa 1757915
Query: 125 cctcaacgccagccacagcctggcgccgaaccagagcctggagtggcaactgg 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757914 cctcaacgccagccacagcctggcgccgaaccagagcctggagtggcaactgg 1757862
>gb|CP000744.1| Pseudomonas aeruginosa PA7, complete genome
Length = 6588339
Score = 248 bits (125), Expect = 5e-62
Identities = 163/173 (94%), Gaps = 2/173 (1%)
Strand = Plus / Plus
Query: 7 gagcatcgccctggaagacagcgacttccgcctgtcgctgtccggccaggaag-cgacgg 65
||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 3790551 gagcatcgccctggaggacagcgatttccgcctgtcgctgtccggccaggaagacgacgg 3790610
Query: 66 cttcgaccacgaccacgacggtcacgccctgcgcgacggccgccggctcagcc-cttcaa 124
|||||| |||| ||||||||| || ||||||||||||||||||||||||||| ||||||
Sbjct: 3790611 cttcgatcacgcccacgacggccagtccctgcgcgacggccgccggctcagccgcttcaa 3790670
Query: 125 cctcaacgccagccacagcctggcgccgaaccagagcctggagtggcaactgg 177
|||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3790671 cctcaacgccagccacagcctggcaccgaaccagagcctggagtggcaactgg 3790723
>gb|AC183806.2| Pan troglodytes BAC clone CH251-20A8 from chromosome 1, complete sequence
Length = 235826
Score = 81.8 bits (41), Expect = 6e-12
Identities = 78/89 (87%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 210 taaagaaaagaggtttatttagctca-cgttccgcaggctggcaagttcaaggcgcatgg 268
|||||||||||||||||||||||||| | ||| ||||||||| |||| |||| |||||
Sbjct: 122408 taaagaaaagaggtttatttagctcaccattctgcaggctggaaagtgcaagaaacatgg 122349
Query: 269 tgccagcatctactaagcctctggtgagg 297
||||||||||| || ||| ||||||||||
Sbjct: 122348 tgccagcatctgctcagcttctggtgagg 122320
>gb|AC185967.2| Pan troglodytes BAC clone CH251-708H21 from chromosome 1, complete
sequence
Length = 200375
Score = 81.8 bits (41), Expect = 6e-12
Identities = 78/89 (87%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 210 taaagaaaagaggtttatttagctca-cgttccgcaggctggcaagttcaaggcgcatgg 268
|||||||||||||||||||||||||| | ||| ||||||||| |||| |||| |||||
Sbjct: 30175 taaagaaaagaggtttatttagctcaccattctgcaggctggaaagtgcaagaaacatgg 30116
Query: 269 tgccagcatctactaagcctctggtgagg 297
||||||||||| || ||| ||||||||||
Sbjct: 30115 tgccagcatctgctcagcttctggtgagg 30087
>emb|AL031657.5| Human DNA sequence from clone RP1-28F12 on chromosome 20q11.22-12
Contains the 5' end of the PPP1R16B gene for protein
phosphatase 1 regulatory (inhibitory) subunit 16B and a
CpG island, complete sequence
Length = 120630
Score = 77.8 bits (39), Expect = 1e-10
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 192 ctgacactaggtagtttgtaaagaaaagaggtttatttagctcac-gttccgcaggctgg 250
|||| ||| |||||||| ||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 20139 ctgagactgggtagtttataaagaaaagaggtttatttagctcacggttctgcaggctga 20080
Query: 251 caagttcaagg 261
||||||||||
Sbjct: 20079 gaagttcaagg 20069
>dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clone:RP13-259F12, complete
sequence
Length = 167444
Score = 77.8 bits (39), Expect = 1e-10
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 535 tcaacatgagttttggtggggacaaaggatatccaagccacagcactattt 585
|||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 14869 tcaacatgagttttggtggggacaaactatatccaagccatagcactattt 14919
>dbj|AP002496.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2378D21, complete
sequence
Length = 110702
Score = 77.8 bits (39), Expect = 1e-10
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 535 tcaacatgagttttggtggggacaaaggatatccaagccacagcactattt 585
|||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 92765 tcaacatgagttttggtggggacaaactatatccaagccatagcactattt 92815
>gb|AC008664.6| Homo sapiens chromosome 5 clone CTB-34B5, complete sequence
Length = 132185
Score = 75.8 bits (38), Expect = 4e-10
Identities = 51/54 (94%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 183 aacagaatac-tgacactaggtagtttgtaaagaaaagaggtttatttagctca 235
|||||||||| ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 77504 aacagaatacctgagactgggtagtttgtaaagaaaagaggtttatttagctca 77557
>gb|AC212700.3| Pongo abelii BAC clone CH276-513J22 from chromosome 1, complete
sequence
Length = 199331
Score = 73.8 bits (37), Expect = 2e-09
Identities = 77/89 (86%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 210 taaagaaaagaggtttatttagctca-cgttccgcaggctggcaagttcaaggcgcatgg 268
|||||||||||||||||||||||||| | ||| ||||||||| |||| |||| ||||
Sbjct: 40456 taaagaaaagaggtttatttagctcaccattctgcaggctggaaagtgcaagaaatatgg 40397
Query: 269 tgccagcatctactaagcctctggtgagg 297
||||||||||| || ||| ||||||||||
Sbjct: 40396 tgccagcatctgctcagcttctggtgagg 40368
>gb|AC099064.2| Homo sapiens chromosome 1 clone RP4-754K5, complete sequence
Length = 135547
Score = 73.8 bits (37), Expect = 2e-09
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 210 taaagaaaagaggtttatttagctca-cgttccgcaggctggcaagttcaaggcgcatgg 268
|||||||||||||||||||||||||| | ||| ||||||||| |||| |||| |||||
Sbjct: 33517 taaagaaaagaggtttatttagctcaccattctgcaggctggaaagtgcaagaaacatgg 33576
Query: 269 tgccagcatctactaagcctctggt 293
||||||||||| || ||| ||||||
Sbjct: 33577 tgccagcatctgctcagcttctggt 33601
>gb|AC103552.1| Homo sapiens chromosome 1 clone RP11-442N6, complete sequence
Length = 160837
Score = 73.8 bits (37), Expect = 2e-09
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 210 taaagaaaagaggtttatttagctca-cgttccgcaggctggcaagttcaaggcgcatgg 268
|||||||||||||||||||||||||| | ||| ||||||||| |||| |||| |||||
Sbjct: 108348 taaagaaaagaggtttatttagctcaccattctgcaggctggaaagtgcaagaaacatgg 108407
Query: 269 tgccagcatctactaagcctctggt 293
||||||||||| || ||| ||||||
Sbjct: 108408 tgccagcatctgctcagcttctggt 108432
>gb|AC117465.13| Homo sapiens 3 BAC RP11-706D8 (Roswell Park Cancer Institute Human
BAC Library) complete sequence
Length = 195231
Score = 71.9 bits (36), Expect = 6e-09
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 201 ggtagtttgtaaagaaaagaggtttatttagctcacg-ttccgcaggctggcaagttcaa 259
|||| ||| ||||||||||||||| |||||||||| | ||| ||||||||| || |||||
Sbjct: 9954 ggtaatttataaagaaaagaggttaatttagctcaggattctgcaggctgggaaattcaa 9895
Query: 260 ggcgcatggtgccagcatct 279
| |||||||||||||||||
Sbjct: 9894 gaagcatggtgccagcatct 9875
>gb|AC114399.2| Homo sapiens chromosome 3 clone RP11-1019A2, complete sequence
Length = 180948
Score = 71.9 bits (36), Expect = 6e-09
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 211 aaagaaaagaggtttatttagctcac-gttccgcaggctggcaagttcaaggcgcatggt 269
|||||||||||||||||||||||||| |||| ||||||||| |||| ||||| ||||||
Sbjct: 25034 aaagaaaagaggtttatttagctcacagttctgcaggctgggaagtccaaggagcatggc 25093
Query: 270 gccagcat 277
|||||||
Sbjct: 25094 accagcat 25101
>gb|AC099777.2| Homo sapiens chromosome 3 clone RP11-332H21, complete sequence
Length = 206537
Score = 71.9 bits (36), Expect = 6e-09
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 211 aaagaaaagaggtttatttagctcac-gttccgcaggctggcaagttcaaggcgcatggt 269
|||||||||||||||||||||||||| |||| ||||||||| |||| ||||| ||||||
Sbjct: 23912 aaagaaaagaggtttatttagctcacagttctgcaggctgggaagtccaaggagcatggc 23853
Query: 270 gccagcat 277
|||||||
Sbjct: 23852 accagcat 23845
>ref|NG_012883.2| Homo sapiens kinesin-associated protein 3 (KIFAP3), RefSeqGene on
chromosome 1
Length = 160410
Score = 69.9 bits (35), Expect = 2e-08
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 192 ctgacactaggtagtttgtaaagaaaagaggtttatttagctcac-gttccgcaggctgg 250
|||| |||||||| ||| ||| |||||| ||||||||||||| || ||||||||||||||
Sbjct: 8307 ctgagactaggtaatttataaggaaaaggggtttatttagcttacagttccgcaggctgg 8248
Query: 251 caagttcaagg 261
||||||||||
Sbjct: 8247 gaagttcaagg 8237
>gb|AC022832.13| Homo sapiens chromosome 8, clone RP11-145O15, complete sequence
Length = 166236
Score = 69.9 bits (35), Expect = 2e-08
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 210 taaagaaaagaggtttatttagctcacg-ttccgcaggctggcaagttcaaggcgcatgg 268
||||||||||| |||||||||||||| | ||| ||| ||||| |||||||| | ||||||
Sbjct: 17097 taaagaaaagaagtttatttagctcatggttctgcaagctgggaagttcaaagagcatgg 17156
Query: 269 tgccagcatct 279
|||||||||||
Sbjct: 17157 tgccagcatct 17167
>emb|AL356475.11| Human DNA sequence from clone RP11-332H17 on chromosome 1 Contains the
5' end of the KIFAP3 gene for kinesin-associated protein 3
and a novel gene, complete sequence
Length = 108047
Score = 69.9 bits (35), Expect = 2e-08
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 192 ctgacactaggtagtttgtaaagaaaagaggtttatttagctcac-gttccgcaggctgg 250
|||| |||||||| ||| ||| |||||| ||||||||||||| || ||||||||||||||
Sbjct: 64832 ctgagactaggtaatttataaggaaaaggggtttatttagcttacagttccgcaggctgg 64891
Query: 251 caagttcaagg 261
||||||||||
Sbjct: 64892 gaagttcaagg 64902
>emb|AL136122.6| Human DNA sequence from clone RP3-413L20 on chromosome 6, complete
sequence
Length = 54475
Score = 69.9 bits (35), Expect = 2e-08
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 473 tctgcccccatgactcaagcacctcccattaggtcccacctcc 515
|||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 31299 tctgcccccatgacccaaacacctcccattaggtcccacctcc 31257
>gb|AC090945.1| Homo sapiens chromosome 3 clone RP11-255O19 map 3p, complete sequence
Length = 160285
Score = 69.9 bits (35), Expect = 2e-08
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 473 tctgcccccatgactcaagcacctcccattaggtcccacctcc 515
||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 126520 tctgctcccatgactcaagcacctcccattaggccccacctcc 126478
>ref|NG_007089.1| Homo sapiens arylsulfatase B (ARSB), RefSeqGene on chromosome 5
Length = 216326
Score = 67.9 bits (34), Expect = 9e-08
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 183 aacagaatactgacactaggtagtttgtaaagaaaagaggtttatttagctcac 236
||||||||||||| |||||||| ||| ||||||||| |||||||||| ||||||
Sbjct: 104416 aacagaatactgagactaggtaatttataaagaaaacaggtttatttggctcac 104363
>gb|AC198677.5| Rhesus Macaque BAC CH250-141L22 () complete sequence
Length = 207203
Score = 67.9 bits (34), Expect = 9e-08
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 192 ctgacactaggtagtttgtaaagaaaagaggtttatttagctca-cgttccgcaggctgg 250
|||| ||| |||| ||| |||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 62947 ctgagactgggtaatttataaagaaaagaggtttattttgctcatggttctgcaggctgg 63006
Query: 251 caagttcaaggcgcatgg 268
|||||||||| ||||||
Sbjct: 63007 aaagttcaaggggcatgg 63024
>gb|AC161020.2| Pan troglodytes BAC clone CH251-19C5 from chromosome 7, complete
sequence
Length = 200756
Score = 67.9 bits (34), Expect = 9e-08
Identities = 72/82 (87%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 183 aacagaatact-gacactaggtagtttgtaaagaaaagaggtttatttagct-cacgttc 240
||||||||||| || ||| |||| ||| |||||||||||||||||||||||| | ||||
Sbjct: 93737 aacagaatacttgagactgggtaatttataaagaaaagaggtttatttagctcctagttc 93796
Query: 241 cgcaggctggcaagttcaaggc 262
||||||||| |||||||||||
Sbjct: 93797 tgcaggctggtaagttcaaggc 93818
>gb|AC157088.2| Pan troglodytes BAC clone CH251-497H13 from chromosome unknown,
complete sequence
Length = 220527
Score = 67.9 bits (34), Expect = 9e-08
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 192 ctgacactaggtagtttgtaaagaaaagaggtttatttagctcac-gttccgcaggctgg 250
|||| |||||||| ||| |||||||||||||||| |||||||||| ||| |||||||||
Sbjct: 73234 ctgagactaggtaatttataaagaaaagaggtttgtttagctcacaattctgcaggctgg 73175
Query: 251 caagttcaag 260
|||||||||
Sbjct: 73174 gaagttcaag 73165
>gb|AC149232.2| Pan troglodytes BAC clone CH251-38H5 from 7, complete sequence
Length = 184062
Score = 67.9 bits (34), Expect = 9e-08
Identities = 72/82 (87%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 183 aacagaatact-gacactaggtagtttgtaaagaaaagaggtttatttagct-cacgttc 240
||||||||||| || ||| |||| ||| |||||||||||||||||||||||| | ||||
Sbjct: 48212 aacagaatacttgagactgggtaatttataaagaaaagaggtttatttagctcctagttc 48271
Query: 241 cgcaggctggcaagttcaaggc 262
||||||||| |||||||||||
Sbjct: 48272 tgcaggctggtaagttcaaggc 48293
>gb|AC092447.5| Homo sapiens BAC clone RP11-760D2 from 7, complete sequence
Length = 176547
Score = 67.9 bits (34), Expect = 9e-08
Identities = 72/82 (87%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 183 aacagaatact-gacactaggtagtttgtaaagaaaagaggtttatttagct-cacgttc 240
||||||||||| || ||| |||| ||| |||||||||||||||||||||||| | ||||
Sbjct: 84922 aacagaatacttgagactgggtaatttataaagaaaagaggtttatttagctcctagttc 84981
Query: 241 cgcaggctggcaagttcaaggc 262
||||||||| |||||||||||
Sbjct: 84982 tgcaggctggtaagttcaaggc 85003
>gb|AC107626.2| Homo sapiens chromosome 3 clone RP11-1008M1, complete sequence
Length = 179484
Score = 67.9 bits (34), Expect = 9e-08
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 183 aacagaatac-tgacactaggtagtttgtaaagaaaagaggtttatttagctca 235
|||||||||| |||||||||||| ||| ||||||||| ||||||||||||||||
Sbjct: 124393 aacagaatacctgacactaggtaatttataaagaaaacaggtttatttagctca 124340
>gb|AC114963.2| Homo sapiens chromosome 5 clone RP11-21K15, complete sequence
Length = 81157
Score = 67.9 bits (34), Expect = 9e-08
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 183 aacagaatactgacactaggtagtttgtaaagaaaagaggtttatttagctcac 236
||||||||||||| |||||||| ||| ||||||||| |||||||||| ||||||
Sbjct: 65917 aacagaatactgagactaggtaatttataaagaaaacaggtttatttggctcac 65864
>gb|AC109462.2| Homo sapiens chromosome 16 clone RP11-26L20, complete sequence
Length = 174191
Score = 67.9 bits (34), Expect = 9e-08
Identities = 83/98 (84%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 201 ggtagtttgtaaagaaaagaggtttatttagctcac-gttccgcaggctggcaagttcaa 259
|||| ||| |||||||||||||||||||||| || | |||| ||||| ||| || |||||
Sbjct: 15223 ggtaatttataaagaaaagaggtttatttagttctcggttctgcaggttgggaaattcaa 15164
Query: 260 ggcgcatggtgccagcatctactaagcctctggtgagg 297
| ||||||| ||||||||| ||| || ||||||||||
Sbjct: 15163 gaagcatggtaccagcatctgctatgcttctggtgagg 15126
>gb|AC104443.2| Homo sapiens chromosome 3 clone RP11-306N11, complete sequence
Length = 191509
Score = 67.9 bits (34), Expect = 9e-08
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 183 aacagaatac-tgacactaggtagtttgtaaagaaaagaggtttatttagctca 235
|||||||||| |||||||||||| ||| ||||||||| ||||||||||||||||
Sbjct: 183188 aacagaatacctgacactaggtaatttataaagaaaacaggtttatttagctca 183135
>gb|AC109136.1| Homo sapiens chromosome 16 clone RP11-629D22, complete sequence
Length = 183080
Score = 67.9 bits (34), Expect = 9e-08
Identities = 83/98 (84%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 201 ggtagtttgtaaagaaaagaggtttatttagctcac-gttccgcaggctggcaagttcaa 259
|||| ||| |||||||||||||||||||||| || | |||| ||||| ||| || |||||
Sbjct: 8810 ggtaatttataaagaaaagaggtttatttagttctcggttctgcaggttgggaaattcaa 8869
Query: 260 ggcgcatggtgccagcatctactaagcctctggtgagg 297
| ||||||| ||||||||| ||| || ||||||||||
Sbjct: 8870 gaagcatggtaccagcatctgctatgcttctggtgagg 8907
>gb|AC099485.2| Homo sapiens chromosome 5 clone CTD-2008M24, complete sequence
Length = 114624
Score = 67.9 bits (34), Expect = 9e-08
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 183 aacagaatactgacactaggtagtttgtaaagaaaagaggtttatttagctcac 236
||||||||||||| |||||||| ||| ||||||||| |||||||||| ||||||
Sbjct: 31159 aacagaatactgagactaggtaatttataaagaaaacaggtttatttggctcac 31106
>gb|AC026424.5| Homo sapiens chromosome 5 clone CTD-2174D2, complete sequence
Length = 123003
Score = 67.9 bits (34), Expect = 9e-08
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 201 ggtagtttgtaaagaaaagaggtttatttagctcac-gttccgcaggctggcaagttcaa 259
|||| ||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||||
Sbjct: 5108 ggtaatttataaagaaaagaggtttatttagctcacagttctgcaggctgg-aagttcaa 5166
Query: 260 gg 261
||
Sbjct: 5167 gg 5168
>emb|AL138725.19| Human DNA sequence from clone RP11-528A10 on chromosome 6 Contains an
IMPDH1 (IMP (inosine monophosphate) dehydrogenase 1)
pseudogene, an RNA helicase pseudogene and part of a novel
gene similar to KIAA0161, complete sequence
Length = 165653
Score = 67.9 bits (34), Expect = 9e-08
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 183 aacagaatactgacactaggtagtttgtaaagaaaagaggtttatttagctcac 236
|||||||||| || ||||||| ||| |||||||||||||||||||||||||||
Sbjct: 82575 aacagaatacagaggctaggtaatttataaagaaaagaggtttatttagctcac 82628
>emb|AL078461.38| Human DNA sequence from clone RP5-901O8 on chromosome 20q11.1-11.23
Contains part of the PHF20 gene for PHD finger protein 20,
the COX7BP2 gene for cytochrome c oxidase VIIb subunit
pseudogene 2 and a hypoxia inducible protein 1 (HIG1)
pseudogene, complete sequence
Length = 99876
Score = 67.9 bits (34), Expect = 9e-08
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 192 ctgacactaggtagtttgtaaagaaaagaggtttatttagctcac-gttccgcaggctgg 250
|||| |||||||| ||| |||||||||||||||| |||||||||| ||| |||||||||
Sbjct: 56720 ctgagactaggtaatttataaagaaaagaggtttgtttagctcacaattctgcaggctgg 56779
Query: 251 caagttcaag 260
|||||||||
Sbjct: 56780 gaagttcaag 56789
>emb|AL109977.7| Human DNA sequence from clone RP4-591F14 on chromosome 20, complete
sequence
Length = 37521
Score = 67.9 bits (34), Expect = 9e-08
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 197 actaggtagtttgtaaagaaaagaggtttatttagctca-cgttccgcaggctggcaagt 255
|||||||||||||||||||||||||||||| || ||||| |||| | ||||||| ||||
Sbjct: 34082 actaggtagtttgtaaagaaaagaggtttacttggctcatggttctggaggctgggaagt 34023
Query: 256 tcaagg 261
||||||
Sbjct: 34022 tcaagg 34017
>gb|AC010245.4|AC010245 Homo sapiens chromosome 5 clone CTC-366B18, complete sequence
Length = 117840
Score = 67.9 bits (34), Expect = 9e-08
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Minus
Query: 201 ggtagtttgtaaagaaaagaggtttatttagctcac-gttccgcaggctggcaagttcaa 259
|||| ||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||||
Sbjct: 68353 ggtaatttataaagaaaagaggtttatttagctcacagttctgcaggctgg-aagttcaa 68295
Query: 260 gg 261
||
Sbjct: 68294 gg 68293
>gb|AC008488.7|AC008488 Homo sapiens chromosome 5 clone CTC-424O12, complete sequence
Length = 208117
Score = 67.9 bits (34), Expect = 9e-08
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 201 ggtagtttgtaaagaaaagaggtttatttagctcac-gttccgcaggctggcaagttcaa 259
|||| ||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||||
Sbjct: 169330 ggtaatttataaagaaaagaggtttatttagctcacagttctgcaggctgg-aagttcaa 169388
Query: 260 gg 261
||
Sbjct: 169389 gg 169390
>gb|AC015971.4| Homo sapiens BAC clone RP11-269K22 from 2, complete sequence
Length = 163852
Score = 67.9 bits (34), Expect = 9e-08
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 264 catggtgccagcatctactaagcctctggtgaggcttctgtgctgc 309
|||||||||||||||| || ||| ||||||||||||||||||||||
Sbjct: 65220 catggtgccagcatctgctcagcttctggtgaggcttctgtgctgc 65265
>ref|XM_002814885.1| PREDICTED: Pongo abelii hypothetical protein LOC100450077
(LOC100450077), mRNA
Length = 1945
Score = 65.9 bits (33), Expect = 4e-07
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 201 ggtagtttgtaaagaaaagaggtttatttagctcac-gttccgcaggctggcaagttcaa 259
|||| ||| ||||||||||||| ||||||||||||| |||||| ||||||| ||||||||
Sbjct: 1590 ggtaatttataaagaaaagaggcttatttagctcacagttccgtaggctgggaagttcaa 1531
Query: 260 g 260
|
Sbjct: 1530 g 1530
>gb|AC187369.3| Pan troglodytes BAC clone CH251-582D12 from chromosome 7, complete
sequence
Length = 192665
Score = 65.9 bits (33), Expect = 4e-07
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 201 ggtagtttgtaaagaaaagaggtttatttagctca-cgttccgcaggctggcaagttcaa 259
|||| ||| |||||||||||||||||||| ||||| |||| ||||||||| ||||||||
Sbjct: 108307 ggtactttataaagaaaagaggtttattttgctcatggttctgcaggctggaaagttcaa 108366
Query: 260 ggcgcatgg 268
|| ||||||
Sbjct: 108367 ggggcatgg 108375
>emb|CT867968.2| Human DNA sequence from clone XX-HCC1954_40K18, complete sequence
Length = 75233
Score = 65.9 bits (33), Expect = 4e-07
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 475 tgcccccatgactcaagcacctcccattaggtcccacctcc 515
|||||||||||||||| || |||||||||||||||||||||
Sbjct: 4256 tgcccccatgactcaaacaactcccattaggtcccacctcc 4296
>emb|CT867979.1| Human DNA sequence from clone XX-HCC1954_40K17, complete sequence
Length = 75233
Score = 65.9 bits (33), Expect = 4e-07
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 475 tgcccccatgactcaagcacctcccattaggtcccacctcc 515
|||||||||||||||| || |||||||||||||||||||||
Sbjct: 4256 tgcccccatgactcaaacaactcccattaggtcccacctcc 4296
>gb|AC114483.2| Homo sapiens chromosome 1 clone RP4-600M23, complete sequence
Length = 108795
Score = 65.9 bits (33), Expect = 4e-07
Identities = 71/81 (87%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 183 aacagaatac-tgacactaggtagtttgtaaagaaaagaggtttatttagctcac-gttc 240
|||||||||| ||| ||| |||| ||| |||||||||||||||||||||| |||| ||||
Sbjct: 69921 aacagaatacctgaaactgggtaatttataaagaaaagaggtttatttaggtcacggttc 69980
Query: 241 cgcaggctggcaagttcaagg 261
||||||||| |||||||||
Sbjct: 69981 tgcaggctgggcagttcaagg 70001
>gb|AC010299.8| Homo sapiens chromosome 5 clone CTB-174J2, complete sequence
Length = 107689
Score = 65.9 bits (33), Expect = 4e-07
Identities = 46/49 (93%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 210 taaagaaaagaggtttatttagctcac-gttccgcaggctggcaagttc 257
||||||||||||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 100839 taaagaaaagaggtttatttagctcacggttctgcaggctgggaagttc 100791
>gb|AC091821.3| Homo sapiens chromosome 5 clone CTC-325G23, complete sequence
Length = 141771
Score = 65.9 bits (33), Expect = 4e-07
Identities = 46/49 (93%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 210 taaagaaaagaggtttatttagctcac-gttccgcaggctggcaagttc 257
||||||||||||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 138448 taaagaaaagaggtttatttagctcacggttctgcaggctgggaagttc 138496
>emb|AL589745.8| Human DNA sequence from clone RP11-478K15 on chromosome 13 Contains
parts of four novel genes, the 5' end of a novel gene and
a CpG island, complete sequence
Length = 170765
Score = 65.9 bits (33), Expect = 4e-07
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 473 tctgcccccatgactcaagcacctcccattaggtcccacctccctacac 521
|||||||||||||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 55625 tctgcccccatgacccaaacacctcccattaggacccacctcccaacac 55673
Score = 61.9 bits (31), Expect = 6e-06
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 198 ctaggtagtttgtaaagaaaagaggtttatttagctcac 236
||||||| ||| |||||||||||||||||||||||||||
Sbjct: 55320 ctaggtaatttataaagaaaagaggtttatttagctcac 55358
>gb|AC087312.8| Homo sapiens 12p BAC RP11-615I16 (Roswell Park Cancer Institute Human
BAC Library) complete sequence
Length = 148543
Score = 65.9 bits (33), Expect = 4e-07
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 210 taaagaaaagaggtttatttagctca-cgttccgcaggctggcaagttcaagg 261
|||||||||||||||||||||||||| |||| |||||||| |||||||||||
Sbjct: 56068 taaagaaaagaggtttatttagctcatggttctgcaggctgacaagttcaagg 56120